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Protein Overview: Peritrophin-A-PA...

General Information:
Name(s) found: Peritrophin-A-PB / FBpp0077028 [FlyBase]
Peritrophin-A-PA / FBpp0077027 [FlyBase]
Description(s) found:
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  • gi|7295617|gb|AAF50926.1| peritrophin A, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|2623256|gb|AAB86431.1| peritrophin A [Drosophila melanogaster] [NCBI NR]
  • gi|24643467|ref|NP_728324.1| peritrophin A, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|22832687|gb|AAN09563.1| peritrophin A, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|17862270|gb|AAL39612.1| LD20793p [Drosophila melanogaster] [NCBI NR]
  • gi|17647807|ref|NP_523418.1| peritrophin A, isoform A [Drosophila melanogaster] [NCBI NR]
  • The gene Peritrophin A is referred to in FlyBase by the symbol Dmel\Peritrophin-A (CG17058, FBgn0022770). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:20115727..20119273. It has the cytological map location 19C1. Based on sequence similarity, it is predicted to have molecular function</span>: chitin binding; structural constituent of peritrophic membrane. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: chitin metabolic process. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG17058-PA translation from_gene[CG17058 Peritrophin-A FBgn0022770] seq_release:3 mol_weight=25492 cds_boundaries:(X:19,917,728..19,920,620[+]) aa_length:230 transcript_info:[CG17058-RA seq_release:3] gene_info:[gene symbol:Peritrophin-A FBgn0022770 g [hmr_yeast5_DM3-1_pombe.fasta]
  • >CG17058-PB translation from_gene[CG17058 Peritrophin-A FBgn0022770] seq_release:3 mol_weight=25492 cds_boundaries:(X:19,917,728..19,920,620[+]) aa_length:230 transcript_info:[CG17058-RB seq_release:3] gene_info:[gene symbol:Peritrophin-A FBgn0022770 g [hmr_yeast5_DM3-1_pombe.fasta]
  • (O17452) PERITROPHIN-A protein (LD20793p) [DrosMelano7227.FASTAC.txt]
  • (AE003572) Peritrophin-A gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG17058-PB, isoform B [Drosophila melanogaster]gi|7295617|gb|AAF50926.1| CG17058-PA, isoform A [Drosophila melanogaster]gi|17862270|gb|AAL39612.1| LD20793p [Drosophila melanogaster]gi|24643467|ref|NP_728324.1| CG17058-PB [Drosophila melanogaster]gi|17 [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-P [fly-100309-contam.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-P [fly-100309-contam.fasta]
  • CG17058-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Peritrophin A CG17058-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • LD20793p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Peritrophin A CG17058-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • peritrophin A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG17058-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • LD20793p OS=Drosophila melanogaster GN=Peritrophin-A PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926,FlyMine:FBpp0077027,modMine:FBpp0077027; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(20115957..20116008,20117979..20118194,20118266..20118460,20118623..20118852); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926,FlyMine:FBpp0077027,modMine:FBpp0077027; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926,FlyMine:FBpp0077027,modMine:FBpp0077027; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • LD20793p OS=Drosophila melanogaster GN=Peritrophin-A PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0077027 type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926,FlyMine:FBpp0077027,modMine:FBpp0077027; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0077028 type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077027; name=Peritrophin-A-PA; parent=FBgn0022770,FBtr0077335; dbxref=FlyBase:FBpp0077027,GB_protein:AAF50926.1,FlyBase_Annotation_IDs:CG17058-PA,REFSEQ:NP_523418,GB_protein:AAF50926,UniProt/TrEMBL:O17452,FlyMine:FBpp0077027,modMine:FBpp0077027; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(20244883..20244934,20246905..20247120,20247192..20247386,20247549..20247778); ID=FBpp0077028; name=Peritrophin-A-PB; parent=FBgn0022770,FBtr0077336; dbxref=FlyBase:FBpp0077028,GB_protein:AAN09563.1,FlyBase_Annotation_IDs:CG17058-PB,REFSEQ:NP_728324,GB_protein:AAN09563,UniProt/TrEMBL:O17452; MD5=63e35761c8a887097cc891e6bd7f01d9; length=230; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 230 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEA]
    Biological Process: chitin metabolic process [IEA]
    Molecular Function: chitin binding [IEA][NAS][RCA]
    structural constituent of peritrophic membrane [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFQVCSVL ILAWIACGHA LAVGSPECPE KYGVQAYAHT ENCDQFFLCT NGTLTLETCE  60
   61 NGLLFDGKGA VHNHCNYNWA VDCKGRQWDP TPISTPACEY QFGLYAVSKD CSTTYIKCAH 120
  121 GEPHEQDCDA GLAYDERIHG CNWPDQLLEH CNPEAVVGFK CPTKVDPNSV AARFWPFPRF 180
  181 PVAGDCHRLI TCVEGHPRLI SCGEDKVFDE HTLTCEDPEY ASGSCANYGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..86] FFAS03 2.18 Tachycitin
    2 View Details [87..155] PSI-BLAST 10.39794 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase
    3 View Details [156..230] FFAS03 2.83 Tachycitin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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