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Protein Overview: vfl-PA, vfl-PB, ...

General Information:
Name(s) found: FBpp0311265 [FlyBase]
vfl-PA / FBpp0074577 [FlyBase]
vfl-PB / FBpp0074576 [FlyBase]
Description(s) found:
Found 36 descriptions.
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  • type=protein; loc=X:complement(19671529..19676319); ID=FBpp0311265; name=vfl-PG; parent=FBgn0259789,FBtr0345014; dbxref=FlyBase:FBpp0311265,FlyBase_Annotation_IDs:CG12701-PG; MD5=5502636ebe51ae6fa97d146d5a858330; length=1596; release=r5.56; species=Dmel; [FlyBase]
  • The gene vielfaltig is referred to in FlyBase by the symbol Dmel\vfl (CG12701, FBgn0259789). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19670020..19676961. It has the cytological map location 18F. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding; nucleic acid binding. There is experimental evidence that it is involved in the biological process</span>: mitotic cell cycle. 9 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: nervous system; organ system; peripheral nervous system; adult segment; embryonic nervous system; adult mesothoracic segment; developing anatomical structure; blastoderm embryo; embryonic neuron; axon. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene vielfaltig is referred to in FlyBase by the symbol Dmel\vfl (CG12701, FBgn0259789). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:19670020..19676961. It has the cytological map location 18F. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: zinc ion binding; nucleic acid binding. There is experimental evidence that it is involved in the biological process</span>: mitotic cell cycle. 9 alleles are reported. The phenotypes of these alleles are annotated with 11 unique terms, many of which group under: nervous system; organ system; peripheral nervous system; adult segment; embryonic nervous system; adult mesothoracic segment; developing anatomical structure; blastoderm embryo; embryonic neuron; axon. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1596 amino acids

    Gene Ontology:
    Cellular Component: chromatin [IDA]
    nucleoplasm [IDA]
    Biological Process: mitotic cell cycle [IMP]
    Molecular Function: nucleic acid binding [IEA]
    zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIKTEMPP LHAAEALASS SATDSGGGGA GGGGGGGGGG SGGPGAGGTG GVGSAPATPN  60
   61 ATISAAADSS DNQPGTPQPT QQQQSTQQQL QQPQSQQQQQ QAMGGGDPQQ QQQQQQVTGI 120
  121 THQPYATHHM YSASGGQQQQ QQQIYGGLYG GDMQQQQGYA SSYINSYEQF YQQQQQQQQG 180
  181 TDYAFGTVGV DYGKSAGVRY HPYLQTPTSG LGGIPTASSA QEEAGSAPSA VSTTTAVAMS 240
  241 PRVVSSSSPT STSSHLQLGS SSGQTPGSPG GAAGSAGCKL QCKKCGILTT NESELQEHIA 300
  301 NVHGESPYGS SGYASSPYIK EEMPTPQPPG VGSATANPGE LLDLDSQKMV YHQQLLQQQQ 360
  361 QQHDVVAGLP LGALPDPLHS MQSMQQRALH SWEQQPQQTV ASVEGLPPYM QQGLGVGLGV 420
  421 GVDKSPYYSP KQSPYHQSTG VGGATLIKQE YGGHGLIKSE YPDSQHYVDK SFDPTAGGAG 480
  481 GAELCASVAT SPAEFPSTTT GGPGQEGAAG AAPGGGYRGF EPPSSSSVLP ANSLTAKAAT 540
  541 WKSNEARRPK TYNCTACNKW FTSSGHLKRH YNTTLHKNAV KSSGQPDPAT LPISAHHHPA 600
  601 RDPVTKPSRR GNAAAAAAAA AAAASASGQG QQQQPPIPPP PANVPPPEPP RSPPDYGGGG 660
  661 GLGVGAMGGA AMSQYSASPS PTQQQQHHLN HHQQQANGYA NGTANGYGYM QQQVQSTTNA 720
  721 SPQHASNNNS NNQQQQQQQQ QHHQQQMPQH HNSVLNGHPN GLAGPSAPHN NNTTQMPSSQ 780
  781 MRGLLNETTT TPPPTTTTRA PQITTTATTT TTAATTVAIK SEQMEDSNHT HTHTHTHPNH 840
  841 SHSQDRSHSS SSSSSMATEE AEEQELRDQE QADDHLHQHQ QASQQYLLSA RHYHSSTPNT 900
  901 LSSSNTNPST PSSNSPHTIY RQEQQGTDFS RTTPPPQPLP PMGMLPPMAM DYNMLALDMP 960
  961 MPMPTLMHSN MLQCSSTSTT PLATTITTSM PDTMQPPQQQ LVHHYQAVLH PLHQQLGEQH1020
 1021 QRQEADHHQQ QRELHQLDQQ QQQQQALILA DSLPHSSSSP TSSSPPPTMP MPLTTITAPQ1080
 1081 LLPLQPPPPH ITSTMPMPPT MHMPIMPPPP QCYQQLQPLD PTMSYHTIIG SGPEAHTGTA1140
 1141 GGGYSNQITT SDGQILQLMP TSLFAPYAPL SPYSVAAQRS PQEGDLPPVH TLTTALHAHQ1200
 1201 QGGQQEAQTP TLTVLSTPYS PTVSSSRATP ALEMDMATLM QHHQDYEMEQ YQMQHQQLDQ1260
 1261 MQQHQQQLDH QQQQQILADQ TQTMAQQPLA KKRRGGNATP STTKRRRNSS VGSTSPHSTT1320
 1321 LPSGRIKCLE CDKEFTKNCY LTQHNKSFHS GEYPFRCQKC GKRFQSEDVY TTHLGRHRTQ1380
 1381 DKPHKCELCP KQFHHKTDLR RHVEAIHTGL KQHMCDICEK GFCRKDHLRK HLETHNRPRV1440
 1441 VGKKSAAAAA AAAAAAAVTA TAGLGGAPAA GSIKAAFARS LTVTAVSSEP GAGVAIPSAP1500
 1501 ATATCAPVSV SASALVQAVN PSLTSGLSLK RHIDDVAVDD DSLLEEDEDE MEMEMEMDML1560
 1561 EEEDEEEEEL GDHHMIIKSE YVQEEFQMIE KSIELY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..55] deduced N/A No confident structure predictions are available.
    2 View Details [56..277] deduced N/A No confident structure predictions are available.
    3 View Details [278..496] deduced N/A No confident structure predictions are available.
    4 View Details [497..564] deduced N/A No confident structure predictions are available.
    5 View Details [565..630] deduced N/A No confident structure predictions are available.
    6 View Details [631..726] deduced N/A No confident structure predictions are available.
    7 View Details [727..835] MSA 1.031996 View MSA. No confident structure predictions are available.
    8 View Details [836..996] MSA 1.225995 View MSA. No confident structure predictions are available.
    9 View Details [997..1055] MSA 3.52199 View MSA. No confident structure predictions are available.
    10 View Details [1056..1324] deduced N/A No confident structure predictions are available.
    11 View Details [1325..1494] PSI-BLAST 59.154902 No description for 2i13A was found.
    12 View Details [1495..1596] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle