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Protein Overview: CG6540-PA

General Information:
Name(s) found: CG6540-PA / FBpp0074372 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG6540 (CG6540, FBgn0030943). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:18542220..18543522. It has the cytological map location 17C7. Its molecular function is unknown. The biological processes in which it is involved are not known. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPMNLGSPV NSPGSNQTQY LPPFLLGDPQ GITPHKNTLS PKTGRSNISF ATSPGGSSPH  60
   61 ELNRSALSTR TLFAAQGGAH TAVGANSSTT AHGQTHSHHQ TGPPTQGLFD SLREQSVTPK 120
  121 KKNHLGMLQL QSPNQSYQSS YHTNDSFAPG APNAINASMR ALCSPLGATA SPAGGLGTSV 180
  181 TTGGNSRLSD FWVTIFGFPP GAGSMVLQHF TVCGTIVDVV HAPQNGNWMY VRYSSRIESD 240
  241 KALNYNEKII AGNVMVGVSR CTDRSVIDKE NIGSVPNAEI GDPPTSPSAI RPFSQQSYKL 300
  301 ARKDNIISPQ KDVPQKSSGL MDKAMDLIFG W

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] MSA 4.112995 View MSA. No confident structure predictions are available.
    2 View Details [106..331] PSI-BLAST 19.522879 Crystal structure of the MPPN domain of mouse Nup35


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle