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Protein Overview: CG8611-PB

General Information:
Name(s) found: CG8611-PB / FBpp0074214 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG8611 (CG8611, FBgn0027602). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17307830..17316188. It has the cytological map location 16A5. Based on sequence similarity, it is predicted to have molecular function</span>: ATP-dependent RNA helicase activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 975 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent RNA helicase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENISLNVT VKSSARKNQQ QSPALSVKKR AQKSQDFDFQ FNVDKPKVKA IVVRRRAPPS  60
   61 KVEPTNSSVP NTTKSPTPSV SSSKSAISTL SASPKANASN DDLMFNVSPT KPPVKSVLGD 120
  121 DFMLNVTTKP VVAQKAKPKI TRAERLGKKQ RQGKPLTKLS EEQITRALKS NKKPKNPNQL 180
  181 PTPGDLFRAQ LEEERRQKRR EEGGGDQEAS ADEEDAKNNS GGGSPRVKPS SAVKESKKSS 240
  241 DIEDSGESGE ESATSDEEPD ESSAQSPGQE KEPKQTAKKP PKAEETSSTN RFRTKKIGLF 300
  301 DQSDVEALKQ LGQRAVKPVK ETIFTGSKIS TLGLHPHAVK NLEDLLSIRE LTSVQQKTIP 360
  361 EVLQGKDVLV RSQTGSGKTL AYALPLVELL QKQQPRIQRK DGVLALVIVP TRELVMQTYE 420
  421 LIQKLVKPYT WIVPGSLLGG ESRKSEKARL RKGINILIGT PGRLVDHLLH TASFKLTKLQ 480
  481 FLILDEADRL LELGYERDVK QLVEAIDKQR AECEDKELPQ LQRMLLSATL TSQVQQLAGL 540
  541 TLKNPLYIDN SDEAASAALK SKDGYQKETI EALLEVDDGL GEYQEDVTGV LSIPENLQLS 600
  601 YVVVPPKLRL VALSSLLAKE VDASPKQFKA IVFMSTTEMV NFHHDMLNEA LTRRVLDEED 660
  661 EQEKGDSDDD GDIPLLQGLR FFKLHGSMTQ TERQGVFRGF RDCASCVLLA TDVVGRGIDV 720
  721 PDIKLVVQYT PPQTTADFVH RVGRTARAGR KGRAVLFLTP SEAQFVRHLE KKRIRIQQGD 780
  781 MYAYLQTLLP KDDEARTVQE AASNLQHKFQ TLLEDDRELH DKSCKAFVSW MKFYSTFPKE 840
  841 LKPIFNVRIA HMGHFAKSFA LKEAPSKFAA KHAAPKAAPP TNRLTYTERD PEKIQAQKRA 900
  901 KRRFTTTVSG EVRQLQQRDV GAQKPGAPPP KGGFIGGGVG RSSFMKSLGK SRALNMSEFD 960
  961 SGLPPEGAAK RRKQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] MSA 3.338997 View MSA. No confident structure predictions are available.
    2 View Details [161..269] deduced N/A No confident structure predictions are available.
    3 View Details [270..780] PSI-BLAST 88.69897 No description for 2db3A was found.
    4 View Details [781..865] PSI-BLAST 28.045757 Nucleotide excision repair enzyme UvrB
    5 View Details [866..975] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle