Protein Overview: CG8611-PA

General Information:
Name(s) found:	CG8611-PA / FBpp0074213 [FlyBase]
Description(s) found: SHOW ONLY BEST	gi\|5052508\|gb\|AAD38584.1\|AF145609_1 BcDNA.GH02833 [Drosophila melanogaster] [NCBI NR] gi\|22832445\|gb\|AAF48727.2\| CG8611, isoform A [Drosophila melanogaster] [NCBI NR] gi\|18859659\|ref\|NP_573214.1\| CG8611, isoform A [Drosophila melanogaster] [NCBI NR] This gene is referred to in FlyBase by the symbol Dmel\CG8611 (CG8611, FBgn0027602). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:17307830..17316188. It has the cytological map location 16A5. Based on sequence similarity, it is predicted to have molecular function</span>: ATP-dependent RNA helicase activity. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase] >CG8611-PA translation from_gene[CG8611 BcDNA:GH02833 FBgn0027602] seq_release:3 mol_weight=107841 cds_boundaries:(X:17,145,343..17,153,001[-]) aa_length:974 transcript_info:[CG8611-RA seq_release:3] gene_info:[gene symbol:BcDNA:GH02833 FBgn0027602 gen [hmr_yeast5_DM3-1_pombe.fasta] (Q9Y159) BCDNA.GH02833 (CG8611 protein) [DrosMelano7227.FASTAC.txt] CG8611-PA, isoform A [Drosophila melanogaster]gi\|5052508\|gb\|AAD38584.1\| BcDNA.GH02833 [Drosophila melanogaster]gi\|18859659\|ref\|NP_573214.1\| CG8611-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas] type=protein; loc=X:complement(17308414..17308675,17309003..17309192,17313481..17313908,17313969..17315953,17316016..17316075); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_ [fly-100309-contam.fasta] BcDNA.GH02833 [Drosophila melanogaster] [nr-271106-contam.fasta] CG8611-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta] type=protein; loc=X:complement(17308414..17308675,17309003..17309192,17313481..17313908,17313969..17315953,17316016..17316075); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta] type=protein; loc=X:complement(17308414..17308675,17309003..17309192,17313481..17313908,17313969..17315953,17316016..17316075); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta] Isoform A of Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster GN=CG8611 [UniProt_drosophila_07-01-2011_reversed.fasta] type=protein; loc=X:complement(17308414..17308675,17309003..17309192,17313481..17313908,17313969..17315953,17316016..17316075); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727,FlyMine:FBpp0074213,modMine:FBpp0074213; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta] type=protein; loc=X:complement(join(17421983..17422042,17419936..17421920,17419448..17419875,17414970..17415159,17414381..17414642)); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727,FlyMine:FBpp0074213,modMine:FBpp0074213; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta] type=protein; loc=X:complement(join(17421983..17422042,17419936..17421920,17419448..17419875,17414970..17415159,17414381..17414642)); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727,FlyMine:FBpp0074213,modMine:FBpp0074213; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r6.07; species=Dmel; [fly-08202015-contam.fasta] Isoform of Q86B47, Isoform A of Probable ATP-dependent RNA helicase CG8611 OS=Drosophila melanogaster GN=CG8611 [DROME.fasta.20160308] FBpp0074213 type=protein; loc=X:complement(join(17421983..17422042,17419936..17421920,17419448..17419875,17414970..17415159,17414381..17414642)); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727,FlyMine:FBpp0074213,modMine:FBpp0074213; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta] [fly-122215-dmel-6-09-contam.fasta] type=protein; loc=X:complement(join(17421983..17422042,17419936..17421920,17419448..17419875,17414970..17415159,17414381..17414642)); ID=FBpp0074213; name=CG8611-PA; parent=FBgn0027602,FBtr0074439; dbxref=FlyBase:FBpp0074213,FlyBase_Annotation_IDs:CG8611-PA,GB_protein:AAF48727.2,REFSEQ:NP_573214,GB_protein:AAF48727,FlyMine:FBpp0074213,modMine:FBpp0074213; MD5=54c8df6eb592f1ff0d2803fd1bdb03db; length=974; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
Organism:	Drosophila melanogaster
Length:	974 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVENISLNVT VKSSARKNQQ SPALSVKKRA QKSQDFDFQF NVDKPKVKAI VVRRRAPPSK  60
   61 VEPTNSSVPN TTKSPTPSVS SSKSAISTLS ASPKANASND DLMFNVSPTK PPVKSVLGDD 120
  121 FMLNVTTKPV VAQKAKPKIT RAERLGKKQR QGKPLTKLSE EQITRALKSN KKPKNPNQLP 180
  181 TPGDLFRAQL EEERRQKRRE EGGGDQEASA DEEDAKNNSG GGSPRVKPSS AVKESKKSSD 240
  241 IEDSGESGEE SATSDEEPDE SSAQSPGQEK EPKQTAKKPP KAEETSSTNR FRTKKIGLFD 300
  301 QSDVEALKQL GQRAVKPVKE TIFTGSKIST LGLHPHAVKN LEDLLSIREL TSVQQKTIPE 360
  361 VLQGKDVLVR SQTGSGKTLA YALPLVELLQ KQQPRIQRKD GVLALVIVPT RELVMQTYEL 420
  421 IQKLVKPYTW IVPGSLLGGE SRKSEKARLR KGINILIGTP GRLVDHLLHT ASFKLTKLQF 480
  481 LILDEADRLL ELGYERDVKQ LVEAIDKQRA ECEDKELPQL QRMLLSATLT SQVQQLAGLT 540
  541 LKNPLYIDNS DEAASAALKS KDGYQKETIE ALLEVDDGLG EYQEDVTGVL SIPENLQLSY 600
  601 VVVPPKLRLV ALSSLLAKEV DASPKQFKAI VFMSTTEMVN FHHDMLNEAL TRRVLDEEDE 660
  661 QEKGDSDDDG DIPLLQGLRF FKLHGSMTQT ERQGVFRGFR DCASCVLLAT DVVGRGIDVP 720
  721 DIKLVVQYTP PQTTADFVHR VGRTARAGRK GRAVLFLTPS EAQFVRHLEK KRIRIQQGDM 780
  781 YAYLQTLLPK DDEARTVQEA ASNLQHKFQT LLEDDRELHD KSCKAFVSWM KFYSTFPKEL 840
  841 KPIFNVRIAH MGHFAKSFAL KEAPSKFAAK HAAPKAAPPT NRLTYTERDP EKIQAQKRAK 900
  901 RRFTTTVSGE VRQLQQRDVG AQKPGAPPPK GGFIGGGVGR SSFMKSLGKS RALNMSEFDS 960
  961 GLPPEGAAKR RKQA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..237]	MSA	2.416996	View MSA. No confident structure predictions are available.
2	View Details	[238..791]	PSI-BLAST	93.522879	No description for 2db3A was found.
3	View Details	[792..974]	PSI-BLAST	23.39794	Nucleotide excision repair enzyme UvrB

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: CG8611-PA

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: