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Protein Overview: CG5548-PA, FBpp0...

General Information:
Name(s) found: FBpp0309371 [FlyBase]
FBpp0309370 [FlyBase]
CG5548-PA / FBpp0073777 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=X:14958083..14958436; ID=FBpp0309371; name=CG5548-PC; parent=FBgn0030605,FBtr0340425; dbxref=FlyBase:FBpp0309371,FlyBase_Annotation_IDs:CG5548-PC; MD5=7b6cc91187c494cf169ddfb9bb052b38; length=117; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:14958083..14958436; ID=FBpp0309370; name=CG5548-PB; parent=FBgn0030605,FBtr0340424; dbxref=FlyBase:FBpp0309370,FlyBase_Annotation_IDs:CG5548-PB; MD5=7b6cc91187c494cf169ddfb9bb052b38; length=117; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5548 (CG5548, FBgn0030605). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:14957945..14958597. It has the cytological map location 13A8. Based on sequence similarity, it is predicted to have molecular function</span>: NADH dehydrogenase activity; NADH dehydrogenase (ubiquinone) activity. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mitochondrial electron transport, NADH to ubiquinone. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 117 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial respiratory chain complex I [ISS]
    Biological Process: mitochondrial electron transport, NADH to ubiquinone [ISS]
    Molecular Function: NADH dehydrogenase activity [ISS]
    NADH dehydrogenase (ubiquinone) activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNALTHYMK PDVMPGPDVV PTFDPLLGFK SRKERVMIAT QEEMESAKLP LEFRDYCAHL  60
   61 AIAYQACRSD TFPFVYKCAH QKHEYLTCEY EDYVLRMKEF ERERRLLERQ KRLNKAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..117] Pfam 96.19382 No description for PF05676.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle