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Protein Overview: FBpp0301611, rad-PA

General Information:
Name(s) found: FBpp0301611 [FlyBase]
rad-PA / FBpp0291475 [FlyBase]
Description(s) found:
Found 15 descriptions.
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  • type=protein; loc=X:join(12925118..12925188,12925748..12925853,12926425..12926949,12927276..12928201,12928273..12928396); ID=FBpp0301611; name=rad-PD; parent=FBgn0261379,FBtr0309877; dbxref=FlyBase:FBpp0301611,FlyBase_Annotation_IDs:CG42628-PD; MD5=b296783db41ecfe2ea524cedf645468e; length=583; release=r5.43; species=Dmel; [FlyBase]
  • The gene radish is referred to in FlyBase by the symbol Dmel\rad (CG42628, FBgn0261379). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:12925065..12928682. It has the cytological map location 11E1. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: calcium ion binding; phospholipase A2 activity. There is experimental evidence that it is involved in the biological process</span>: regulation of heart contraction. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 583 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEA]
    Biological Process: anesthesia-resistant memory [TAS]
    lipid catabolic process [IEA]
    regulation of heart contraction [IMP]
    olfactory learning [TAS]
    phospholipid metabolic process [IEA]
    Molecular Function: phospholipase A2 activity [IEA]
    calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKLRHYRSM DQPCSSTCVV IRKKTMTAIC FVCNLPIMSH QVGLVWQGGN GWDDLVREQL  60
   61 EESTIRQRLG GRRDSAAQIT TPPSTSPPPG LQRRRRSSLA QLTDILREWS GGTKQQQQHH 120
  121 SQQQQQQLQQ ASRSKAQLNR RETLADLARS LPWRTSTTTD ASTGAGGSGG GGCTTYMAPR 180
  181 KRRESSADSG IRSMRSRRDS NTAEFVRHWN RRESGAVEEQ PSVSVPVVVE CSKSASRRGS 240
  241 GESYLSSSRR DSNVAGRVTT PPPPGKYQMT KKRDSLAAPE FPNFRQEQRP STSSAGSCSD 300
  301 HSMPLISTHS STHHLAHQQV DSACQALPPP TIITSSVTPP ATSPTAPKGR RDSQTQCGRV 360
  361 NRRDSKAGVS PERAPRLQRL QRQATAFDEG CLPGGSRRGS QPALSPDPPD DCERRTSRRD 420
  421 SLSPDSASRG GRRDSRTHLS PDRSHERDGS PRRHTLRRQS SSAARSPRSP DSNSCCSSRD 480
  481 PSPCSRPQTQ TTVEQNQRPA IRRQSTTEEI LIARGFRRQS TTEEMIRCRN FRRQSSQSDD 540
  541 VCRYRGRRDS SAQIIDGTIG TMTVETTSTF FDSSTQTGEH FDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] deduced N/A No confident structure predictions are available.
    2 View Details [300..498] MSA 7.189994 View MSA. No confident structure predictions are available.
    3 View Details [499..583] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle