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Protein Overview: Psf3-PA, FBpp030...

General Information:
Name(s) found: FBpp0312067 [FlyBase]
FBpp0305498 [FlyBase]
Psf3-PA / FBpp0071399 [FlyBase]
Description(s) found:
Found 53 descriptions.
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  • type=protein; loc=X:complement(10278319..10278459,10278521..10278915,10278984..10279086); ID=FBpp0312067; name=Psf3-PC; parent=FBgn0030196,FBtr0346350; dbxref=FlyBase:FBpp0312067,FlyBase_Annotation_IDs:CG2222-PC; MD5=087c82783855477cecd032ee92c0fa9c; length=212; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(10278319..10278459,10278521..10278915,10278984..10279086); ID=FBpp0305498; name=Psf3-PB; parent=FBgn0030196,FBtr0333306; dbxref=REFSEQ:NP_001259406,GB_protein:AGB95249,FlyBase:FBpp0305498,FlyBase_Annotation_IDs:CG2222-PB; MD5=087c82783855477cecd032ee92c0fa9c; length=212; release=r5.56; species=Dmel; [FlyBase]
  • The gene Psf3 is referred to in FlyBase by the symbol Dmel\Psf3 (CG2222, FBgn0030196). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:10277649..10279167. It has the cytological map location 9B14. There is experimental evidence that it has the molecular function</span>: 3'-5' DNA helicase activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 212 amino acids

    Gene Ontology:
    Cellular Component: GINS complex [IDA]
    Biological Process: NONE FOUND
    Molecular Function: 3'-5' DNA helicase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGMNYFPNY YSIEDIFVTQ EKVECRVNTK LQRMGFLDSG AESDDLEPGR TVNLPLWYIK  60
   61 ELKVNNAYFT VAVPDIYRNV HKAVCEAETT HIELGRLHPY FYEFGRYLTP YDRNHVIGRI 120
  121 IFETLRQRVR HLLDISKSDG QAAKAEHRLD NIEAKLHEAG VRTNSQYIEW LQMTGNKIRT 180
  181 SELVEEHQKK RRRADRSDDE GDALPNSKRA TL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 63.221849 No description for 2q9qD was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3'-5' DNA helicase activity
    		•  0.71044855814709 bayes_pls_golite062009
  • binding
    		•  0.510070128812714 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle