YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG15313-PA

General Information:
Name(s) found: CG15313-PA / FBpp0071353 [FlyBase]
Description(s) found:
SHOW ONLY BEST
  • gi|7291111|gb|AAF46546.1| CG15313 [Drosophila melanogaster] [NCBI NR]
  • gi|24640938|ref|NP_572600.1| CG15313 [Drosophila melanogaster] [NCBI NR]
  • gi|223969227|emb|CAR94344.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223969225|emb|CAR94343.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223969223|emb|CAR94342.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223969215|emb|CAR94338.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223969213|emb|CAR94337.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|223969211|emb|CAR94336.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|194353740|emb|CAQ53662.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • gi|194353736|emb|CAQ53660.1| CG15313-PA [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG15313 (CG15313, FBgn0030173). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9943758..9944448. It has the cytological map location 9A5. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: chitin binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: chitin metabolic process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG15313-PA translation from_gene[CG15313 CG15313 FBgn0030173] seq_release:3 mol_weight=20609 cds_boundaries:(X:9,789,707..9,790,320[+]) aa_length:186 transcript_info:[CG15313-RA seq_release:3] gene_info:[gene symbol:CG15313 FBgn0030173 gene_boundaries [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W2Z1) CG15313 protein [DrosMelano7227.FASTAC.txt]
  • (AE003449) CG15313 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG15313-PA [Drosophila melanogaster]gi|24640938|ref|NP_572600.1| CG15313-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(9943832..9943868,9943925..9944448); ID=FBpp0071353; name=CG15313-PA; parent=FBgn0030173,FBtr0071418; dbxref=FlyBase:FBpp0071353,FlyBase_Annotation_IDs:CG15313-PA,GB_protein:AAF46546.1,REFSEQ:NP_572600,GB_protein:AAF46546; MD5=5b9d [fly-100309-contam.fasta]
  • CG15313-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(9943832..9943868,9943925..9944448); ID=FBpp0071353; name=CG15313-PA; parent=FBgn0030173,FBtr0071418; dbxref=FlyBase:FBpp0071353,FlyBase_Annotation_IDs:CG15313-PA,GB_protein:AAF46546.1,REFSEQ:NP_572600,GB_protein:AAF46546; MD5=5b9d4650d28be7de1d1e82ef0991d154; length=186; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(9943832..9943868,9943925..9944448); ID=FBpp0071353; name=CG15313-PA; parent=FBgn0030173,FBtr0071418; dbxref=FlyBase:FBpp0071353,FlyBase_Annotation_IDs:CG15313-PA,GB_protein:AAF46546.1,REFSEQ:NP_572600,GB_protein:AAF46546; MD5=5b9d4650d28be7de1d1e82ef0991d154; length=186; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG15313 OS=Drosophila melanogaster GN=Cht6 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 186 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEA]
    Biological Process: chitin metabolic process [IEA]
    Molecular Function: chitin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHYQLLARE SVSRQLIPRP RRPQSTTSTP PTTTTSGSTL RSTTSAGHSA PPLSRRQQSR  60
   61 RRPHKYIEVY SRPPAKTAVI SATSSSQFLD EGFPVVHSQV AQRRRSGSIL PTKNDPKVIV 120
  121 HGHGIIECRA QGNFPHPLNC RKFISCARFE ETGGIVGWEY TCPKGLTYDG VGGMCTWSPS 180
  181 DQPCRD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..186] PSI-BLAST 14.154902 Specificity and affnity of natural product cyclopentapeptide inhibitor Argadin against human chitinase


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle