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Protein Overview: CG1889-PA, CG1889-PC

General Information:
Name(s) found: CG1889-PC / FBpp0111882 [FlyBase]
CG1889-PA / FBpp0071343 [FlyBase]
Description(s) found:
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  • gi|7291101|gb|AAF46536.1| CG1889, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|66772465|gb|AAY55544.1| IP03604p [Drosophila melanogaster] [NCBI NR]
  • gi|18858063|ref|NP_572592.1| CG1889, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|16197867|gb|AAL13584.1| GH12692p [Drosophila melanogaster] [NCBI NR]
  • gi|161077694|ref|NP_001096931.1| CG1889, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|158031770|gb|ABW09378.1| CG1889, isoform C [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1889 (CG1889, FBgn0030164). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:9859274..9860995. It has the cytological map location 9A3. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: receptor binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: signal transduction. 3 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG1889-PA translation from_gene[CG1889 CG1889 FBgn0030164] seq_release:3 mol_weight=36564 cds_boundaries:(X:9,705,258..9,706,504[+]) aa_length:332 transcript_info:[CG1889-RA seq_release:3] gene_info:[gene symbol:CG1889 FBgn0030164 gene_boundaries:(X:9 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W301) CG1889 protein (GH12692P) [DrosMelano7227.FASTAC.txt]
  • (AE003449) CG1889 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG1889-PA, isoform A [Drosophila melanogaster]gi|16197867|gb|AAL13584.1| GH12692p [Drosophila melanogaster]gi|18858063|ref|NP_572592.1| CG1889-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_5725 [fly-100309-contam.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09 [fly-100309-contam.fasta]
  • CG1889-PA, isoform A [Drosophila melanogaster] [nr-271106-contam.fasta]
  • IP03604p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GH12692p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1889, isoform A OS=Drosophila melanogaster GN=CG1889 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536,FlyMine:FBpp0071343,modMine:FBpp0071343; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(9859383..9859493,9859619..9859803,9859870..9860430,9860491..9860632); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536,FlyMine:FBpp0071343,modMine:FBpp0071343; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536,FlyMine:FBpp0071343,modMine:FBpp0071343; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of Q8IRM2, CG1889, isoform A OS=Drosophila melanogaster GN=CG1889 PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0071343 type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536,FlyMine:FBpp0071343,modMine:FBpp0071343; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0111882 type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0071343; name=CG1889-PA; parent=FBgn0030164,FBtr0071408; dbxref=FlyBase:FBpp0071343,FlyBase_Annotation_IDs:CG1889-PA,GB_protein:AAF46536.1,REFSEQ:NP_572592,GB_protein:AAF46536,UniProt/TrEMBL:Q9W301,FlyMine:FBpp0071343,modMine:FBpp0071343; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(9965350..9965460,9965586..9965770,9965837..9966397,9966458..9966599); ID=FBpp0111882; name=CG1889-PC; parent=FBgn0030164,FBtr0112969; dbxref=FlyBase:FBpp0111882,FlyBase_Annotation_IDs:CG1889-PC,REFSEQ:NP_001096931,GB_protein:ABW09378,UniProt/TrEMBL:Q9W301; MD5=0dd5bbf51f737bf601bda34f1a18eb68; length=332; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: signal transduction [IEA]
    Molecular Function: receptor binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQMLQLDAL VMAMACLSTT QTDLGGGLLV PPSLGNASSS SCPVSALSGL TTRMQSLNNE  60
   61 IASVKEQIGS LQEQLVDLRR AGSAPVVGLA SPNALASRFL DIEPQLLANG GAAAVPITPA 120
  121 NCLKQQHGVV RIRPRSNVEP FFVFCDQKVR NGGWTMVVNR YDGSEDFNRK WADYKIGFGP 180
  181 LTTEFFIGLD KLHQITSSDN YELLVQLQNR KQELRYALYD HFSIGSESEQ YRLNVLGDYH 240
  241 GDAADALRDH TGKKFSTHDR VNDENEQNCA AQQSGAFWYG GSCNLTNPFG LYQRLLERDV 300
  301 DGFKGILWRG FLNGPKGSLK IVRMMVRPRA AL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 61.09691 Fibrinogen C-terminal domains; Fibrinogen gamma chain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.811708735919118 bayes_pls_golite062009
  • protein binding
    		•  0.249736491712423 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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