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Protein Overview: Cp38-PA, Cp38-PB

General Information:
Name(s) found: Cp38-PB / FBpp0289676 [FlyBase]
Cp38-PA / FBpp0071151 [FlyBase]
Description(s) found:
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  • gi|7727|emb|CAA28871.1| chorion protein S38 [Drosophila melanogaster] [NCBI NR]
  • gi|7290943|gb|AAF46383.1| chorion protein 38 [Drosophila melanogaster] [NCBI NR]
  • gi|17530859|ref|NP_511088.1| chorion protein 38 [Drosophila melanogaster] [NCBI NR]
  • gi|162944800|gb|ABY20469.1| IP19709p [Drosophila melanogaster] [NCBI NR]
  • gi|162944792|gb|ABY20465.1| IP19603p [Drosophila melanogaster] [NCBI NR]
  • gi|116226|sp|P07183.1|CH38_DROME RecName: Full=Chorion protein S38 [NCBI NR]
  • pir||S08607 chorion protein s38 - fruit fly (Drosophila melanogaster) [NCBI NR]
  • Chorion protein S38 OS=Drosophila melanogaster GN=Cp38 PE=2 SV=1 [Swiss-Prot]
  • The gene Chorion protein 38 is referred to in FlyBase by the symbol Dmel\Cp38 (CG11213, FBgn0000360). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:8375870..8377344. It has the cytological map location 7F1. It is reported to have molecular function</span>: structural constituent of chorion. It is reported to be involved in the biological process</span>: eggshell chorion assembly. 32 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG11213-PA translation from_gene[CG11213 Cp38 FBgn0000360] seq_release:3 mol_weight=30448 cds_boundaries:(X:8,220,860..8,222,003[+]) aa_length:306 transcript_info:[CG11213-RA seq_release:3] gene_info:[gene symbol:Cp38 FBgn0000360 gene_boundaries:(X:8, [hmr_yeast5_DM3-1_pombe.fasta]
  • (P07183) Chorion protein S38 [DrosMelano7227.FASTAC.txt]
  • (AE003444) Cp38 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11213-PA [Drosophila melanogaster]gi|17530859|ref|NP_511088.1| CG11213-PA [Drosophila melanogaster]gi|103110|pir||S08607 chorion protein s38 - fruit fly (Drosophila melanogaster)gi|7727|emb|CAA28871.1| chorion protein S38 [Drosophila melanogaster]gi [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383; MD5=fda2fee [fly-100309-contam.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.16; speci [fly-100309-contam.fasta]
  • CG11213-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Chorion protein 38 CG11213-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • chorion protein S38 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Chorion protein S38 [nr-271106-contam.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Chorion protein S38 OS=Drosophila melanogaster GN=Cp38 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • Chorion protein 38, isoform B OS=Drosophila melanogaster GN=Cp38 PE=4 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383,FlyMine:FBpp0071151,modMine:FBpp0071151; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(8375947..8375991,8376218..8377093); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=REFSEQ:NP_001162703,GB_protein:ACZ95238,FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383,FlyMine:FBpp0071151,modMine:FBpp0071151; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=REFSEQ:NP_001162703,GB_protein:ACZ95238,FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383,FlyMine:FBpp0071151,modMine:FBpp0071151; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=REFSEQ:NP_001162703,GB_protein:ACZ95238,FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of P07183, Chorion protein 38, isoform B OS=Drosophila melanogaster GN=Cp38 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0071151 type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383,FlyMine:FBpp0071151,modMine:FBpp0071151; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0289676 type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=REFSEQ:NP_001162703,GB_protein:ACZ95238,FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0071151; name=Cp38-PA; parent=FBgn0000360,FBtr0071204; dbxref=FlyBase:FBpp0071151,FlyBase_Annotation_IDs:CG11213-PA,GB_protein:AAF46383.1,REFSEQ:NP_511088,GB_protein:AAF46383,UniProt/Swiss-Prot:P07183,FlyMine:FBpp0071151,modMine:FBpp0071151; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=X:join(8481914..8481958,8482185..8483060); ID=FBpp0289676; name=Cp38-PB; parent=FBgn0000360,FBtr0300448; dbxref=REFSEQ:NP_001162703,GB_protein:ACZ95238,FlyBase_Annotation_IDs:CG11213-PB,FlyBase:FBpp0289676,UniProt/Swiss-Prot:P07183; MD5=fda2fee13e078943b675915554cc192d; length=306; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: eggshell chorion assembly [NAS]
    Molecular Function: structural constituent of chorion [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRSTYIWAL AACLIACASA NYGSSQGYGP ESGSGASDGG ADAASAAAAA AGGAGGAGGE  60
   61 YGGANAGAGA LESGADAAGV AQAGQSSYGS DQNIPYKPVN TKGNTLTSSI TYPQNKGEIL 120
  121 IHRPAPIIVK RPPTKVLVNH PPLVVKPAPV VLHKPPAIVL RKVYVKHHPR RVKVEPVFVN 180
  181 VVKPPAEKYF VNENKQGYGQ GSQSHGHGHG HGGHGHGHSG HGHGGHGAGP HGPGPHDGGR 240
  241 ALPAYASGAD SAAASAGYQL LQSGNQGLSA LANIAGEREG PYGPAPSHQH YSAGPAGHGG 300
  301 YAAPAY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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