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Protein Overview: Ir7c-PA, FBpp0301563

General Information:
Name(s) found: FBpp0301563 [FlyBase]
Ir7c-PA / FBpp0071043 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • type=protein; loc=X:join(7768859..7769713,7769810..7770832); ID=FBpp0301563; name=Ir7c-PB; parent=FBgn0029966,FBtr0309827; dbxref=FlyBase:FBpp0301563,FlyBase_Annotation_IDs:CG15324-PB,REFSEQ:NP_001245572,GB_protein:AFH07286; MD5=2551472ab50fbc777fe270a447ffb7f6; length=625; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ionotropic receptor 7c is referred to in FlyBase by the symbol Dmel\Ir7c (CG15324, FBgn0029966). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:7768859..7770832. It has the cytological map location 7C1. Based on sequence similarity, it is predicted to have molecular function</span>: extracellular-glutamate-gated ion channel activity. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 625 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: NONE FOUND
    Molecular Function: extracellular-glutamate-gated ion channel activity [IEA][ISS]
    ionotropic glutamate receptor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHSAVHNVS LVYALVWAID NYYGMATSTP LAVVQFPTSR ESRRLHNDLI DAALGRSSGT  60
   61 GRIQFLLEDD RVEMTETDTD PPPPSGLTGR PIAIWFLDSL RSYFRLEMYL NQLGSPYKRN 120
  121 GFFLVIYTGL EDQPMESLKI MFRRLLNMYV LNVNVFLQRD GTVHLYTYYP YGPHHCQSSL 180
  181 PVYYTAFQDL AAPANGFGLT KPLFPRKLTN MHGCEMVVAT FEHRPYVIIE DDPKTPGGRS 240
  241 IHGIEGLIFR SLAERMNFTI KLVEQKDKNR GEILPDGNFT GILKMMVDGE VNLTFVCFMY 300
  301 SKARSDLMLP STSYTSFPIV LVVPSGGSIS PMGRLTRPFR YIIWSCILVS LIFGFVLICL 360
  361 LKITALPGLR NLVLGRRNRL PFMGMWASLL GGLALYNPQR NFARYILVMW LLQTLILRAA 420
  421 YTGQLYLLLQ DVEMRSPIKS LSEVLAKDYE FRILPALRTI FKDSMPTTNF HAVLSLEESL 480
  481 YRLRDEDDPG ITVALLQPTV NQFDFRSGPN KRHLTVLPDP LMTAPLTFYM RPHSYFKRRI 540
  541 DRLIMAMMSS GIVARYRKMY MDRIKRVSKR RNLEPKPLSI WRLSGIFVCC AGLYLVALIV 600
  601 FILEILTTNH RRLRRAFNVI NRYAA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..204] MSA 2.340981 View MSA. No confident structure predictions are available.
    2 View Details [205..288] PSI-BLAST 24.69897 Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid
    3 View Details [289..625] PSI-BLAST 20.045757 Crystal Structure Of The NR2A Ligand Binding Core In Complex With Glutamate

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.144254316055515 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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