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Protein Overview: FBpp0309986, FBp...

General Information:
Name(s) found: FBpp0311460 [FlyBase]
FBpp0309987 [FlyBase]
FBpp0309986 [FlyBase]
RpL7A-PD / FBpp0070878 [FlyBase]
RpL7A-PA / FBpp0070877 [FlyBase]
Description(s) found:
Found 60 descriptions.
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  • type=protein; loc=X:complement(6425159..6425464,6425868..6426238,6426331..6426454,6426523..6426537); ID=FBpp0311460; name=RpL7A-PG; parent=FBgn0014026,FBtr0345293; dbxref=FlyBase:FBpp0311460,FlyBase_Annotation_IDs:CG3314-PG; MD5=9dd5cf6ed8fd7a8831cd15e06ca47ffe; length=271; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(6425159..6425464,6425868..6426238,6426331..6426454,6426523..6426537); ID=FBpp0309987; name=RpL7A-PF; parent=FBgn0014026,FBtr0343329; dbxref=FlyBase:FBpp0309987,FlyBase_Annotation_IDs:CG3314-PF; MD5=9dd5cf6ed8fd7a8831cd15e06ca47ffe; length=271; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:complement(6425159..6425464,6425868..6426238,6426331..6426454,6426523..6426537); ID=FBpp0309986; name=RpL7A-PE; parent=FBgn0014026,FBtr0343328; dbxref=FlyBase:FBpp0309986,FlyBase_Annotation_IDs:CG3314-PE; MD5=9dd5cf6ed8fd7a8831cd15e06ca47ffe; length=271; release=r5.56; species=Dmel; [FlyBase]
  • The gene Ribosomal protein L7A is referred to in FlyBase by the symbol Dmel\RpL7A (CG3314, FBgn0014026). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6425049..6427318. It has the cytological map location 6B1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • The gene Ribosomal protein L7A is referred to in FlyBase by the symbol Dmel\RpL7A (CG3314, FBgn0014026). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6425049..6427318. It has the cytological map location 6B1. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle elongation; mitotic spindle organization. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: cytosolic large ribosomal subunit [ISS][NAS]
    ribosome [NAS]
    Biological Process: mitotic spindle elongation [IMP]
    mitotic spindle organization [IMP]
    ribosome biogenesis [IEA]
    translation [ISS][NAS]
    Molecular Function: structural constituent of ribosome [ISS][NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVKKPRPKK KPVTKKVAPA PLAVKKPVVK KVVNQLFEKR PKNFGIGQNV QPKRDLSRFV  60
   61 RWPKYIRVQR QKAVLQKRLK VPPPIHQFSQ TLDKTTAVKL FKLLEKYRPE SPLAKKLRLK 120
  121 KIAEAKAKGK DVEPKKKPSY VSAGTNTVTK LIEQKKAQLV VIAHDVDPLE LVLFLPALCR 180
  181 KMGVPYCIVK GKARLGRLVR RKTCTTLALT TVDNNDKANF GKVLEAVKTN FNERHEEIRR 240
  241 HWGGGILGSK SLARISKLER AKARELAQKQ G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] MSA 6.122987 View MSA. No confident structure predictions are available.
    2 View Details [106..271] PSI-BLAST 25.69897 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle