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Protein Overview: vanin-like-PA

General Information:
Name(s) found: vanin-like-PA / FBpp0070844 [FlyBase]
Description(s) found:
Found 25 descriptions.
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  • The gene vanin-like is referred to in FlyBase by the symbol Dmel\vanin-like (CG32754, FBgn0040069). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:6094220..6096592. It has the cytological map location 5E1. Based on sequence similarity, it is predicted to have molecular function</span>: pantetheine hydrolase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: nitrogen compound metabolic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 558 amino acids

    Gene Ontology:
    Cellular Component: extrinsic to membrane [NAS]
    Biological Process: nitrogen compound metabolic process [IEA]
    Molecular Function: pantetheine hydrolase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTWWWLSV VLLILGLMPG MSQQAALAES DYYTAGVVEF KQSILSLSAW SDSLAGYVEI  60
   61 INSENASATD IIVFPESTLN SAGSTTFVPN PEDQINPCLS DPNATYYEEF LVTLSCAARN 120
  121 ASKYIVINLT EKQKCEDIPE DTRPCASNGL NVFNTNVVFD RQGVVVSRYR KVHLYGEAKN 180
  181 STFLPELITF ETDFGVTFGH FICFDILFYT PAHQLIVEQG ITDFVYPAMW FSQLPFLTAV 240
  241 QTQQGWAYAN DVNLLASGAS RPSIGNSGSG IYHGRSGTLT SVMRQDSGER AIYVAQVPKY 300
  301 TRSRSLKKRA KRSLQEIQTR QVASSSSFYM KRDYVENYES ELLKLDEGTS GAINRTICQG 360
  361 SFCCNFDIAW RSLGTATENG SYYSYRLGTY DGWRNENNVD ANYIRNCALF TCSGDSIDDC 420
  421 GKLLPTEGEL QQSRVTFTRL AIGVTYPESR EFLLFPDTLQ DSLLPLEPSQ FEWSQRKPTE 480
  481 DSYVQEVRFA LKETQELSNL LTFGIYGNYY DNECTFGVGT EEEQLACGYR SGSPGLRILG 540
  541 GWLAMPLIIL AIARTMSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..325] PSI-BLAST 52.39794 hypothetical protein yl85
    2 View Details [326..453] PSI-BLAST 5.69897 No description for 2e18A was found.
    3 View Details [454..558] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.78339175563968 bayes_pls_golite062009
  • hydrolase activity
    		•  1.45996713087211 bayes_pls_golite062009
  • protein binding
    		•  1.4270494960768 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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