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Protein Overview: CG4660-PA

General Information:
Name(s) found: CG4660-PA / FBpp0070851 [FlyBase]
Description(s) found:
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  • gi|24640045|ref|NP_572293.1| CG4660 [Drosophila melanogaster] [NCBI NR]
  • gi|10728491|gb|AAF46120.2| CG4660 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4660 (CG4660, FBgn0029839). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:5972744..5975400. It has the cytological map location 5D4. Its molecular function is unknown. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4660-PA translation from_gene[CG4660 CG4660 FBgn0029839] seq_release:3 mol_weight=29232 cds_boundaries:(X:5,819,453..5,820,872[-]) aa_length:261 transcript_info:[CG4660-RA seq_release:3] gene_info:[gene symbol:CG4660 FBgn0029839 gene_boundaries:(X:5 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9W439) CG4660 protein [DrosMelano7227.FASTAC.txt]
  • (AE003436) CG4660 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4660-PA [Drosophila melanogaster]gi|24640045|ref|NP_572293.1| CG4660-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:complement(5973107..5973517,5973644..5973858,5974370..5974529); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_prote [fly-100309-contam.fasta]
  • CG4660-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:complement(5973107..5973517,5973644..5973858,5974370..5974529); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:complement(5973107..5973517,5973644..5973858,5974370..5974529); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG4660 OS=Drosophila melanogaster GN=CG4660 PE=2 SV=2 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:complement(5973107..5973517,5973644..5973858,5974370..5974529); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120,FlyMine:FBpp0070851,modMine:FBpp0070851; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:complement(join(6080337..6080496,6079611..6079825,6079074..6079484)); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120,FlyMine:FBpp0070851,modMine:FBpp0070851; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:complement(join(6080337..6080496,6079611..6079825,6079074..6079484)); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120,FlyMine:FBpp0070851,modMine:FBpp0070851; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG4660 OS=Drosophila melanogaster GN=CG4660 PE=4 SV=2 [DROME.fasta.20160308]
  • FBpp0070851 type=protein; loc=X:complement(join(6080337..6080496,6079611..6079825,6079074..6079484)); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120,FlyMine:FBpp0070851,modMine:FBpp0070851; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:complement(join(6080337..6080496,6079611..6079825,6079074..6079484)); ID=FBpp0070851; name=CG4660-PA; parent=FBgn0029839,FBtr0070886; dbxref=FlyBase:FBpp0070851,FlyBase_Annotation_IDs:CG4660-PA,GB_protein:AAF46120.2,REFSEQ:NP_572293,GB_protein:AAF46120,UniProt/TrEMBL:Q9W439,FlyMine:FBpp0070851,modMine:FBpp0070851; MD5=e6ec8d785b153e6c331854c077ede193; length=261; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 261 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQLCYLALS VLLAIIVVYG LLELHYFLRM CLCVLLARFV KRRCHILDTT TVNGLCLTND  60
   61 VDTLLYHMNN ARYFRELDFA RVDFYERTNL YRTITGMGGS VFQGAATIRY RRFIRPFHRF 120
  121 NIISRIIYWD EQSLFMEHRF VRPSDKFVHC IAICRQRVID VSMEAVMSEL LPRTSSNGFR 180
  181 ATVLTSLAAP SPAAGGISNP AMDTSLAENG HGTTSGGAAG TGATASATAA HCLKLKPSLP 240
  241 PELAKWIEYN DMSSKNLRSG C

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] PSI-BLAST 4.30103 Hypothetical protein YbaW
    2 View Details [172..261] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.215996736903871 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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