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Protein Overview: CG3527-PA

General Information:
Name(s) found: CG3527-PA / FBpp0070646 [FlyBase]
Description(s) found:
Found 19 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG3527 (CG3527, FBgn0029714). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:4446000..4447039. It has the cytological map location 4C7. Its molecular function is unknown. It is reported to be involved in the biological process</span>: ribosomal small subunit biogenesis; rRNA processing. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [NAS]
    Biological Process: ribosomal small subunit biogenesis [NAS]
    rRNA processing [NAS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGQGKAINR KRKFVGRKAD DPEFDLDKKQ FKVLHLNATE KRLIIVLEGA QLETVKVHNT  60
   61 FELLNCDDHA GIMRKNQRDP GSCRPDITHQ CLLMLFDSPL NRAGLLQVFV RTEHNVLIEI 120
  121 NPQTRIPRTF KRFAGLMVQL LHKFQIRAND SSRRLMSVIK NPITDHVPVG CKKYAMSFSG 180
  181 KLLPNCRDLV PHGDETSASY DEPVVIVIGA FAHGVLKTDY TEELFSISNY PLSAAIACSK 240
  241 ICSAFEEVWG VV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 89.522879 No description for 2v3kA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • RNA methyltransferase activity
    		•  3.73300070859272 bayes_pls_golite062009
  • tRNA methyltransferase activity
    		•  2.75506106783732 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.52574509568717 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.44351066049012 bayes_pls_golite062009
  • S-adenosylmethionine-dependent methyltransferase activity
    		•  2.00166711852993 bayes_pls_golite062009
  • RNA binding
    		•  1.99948490385053 bayes_pls_golite062009
  • tRNA (guanine) methyltransferase activity
    		•  1.9680534181971 bayes_pls_golite062009
  • rRNA methyltransferase activity
    		•  1.94772102267592 bayes_pls_golite062009
  • binding
    		•  1.07947949398964 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.987186921436979 bayes_pls_golite062009
  • catalytic activity
    		•  0.797300463760338 bayes_pls_golite062009
  • transferase activity
    		•  0.489526737652591 bayes_pls_golite062009
  • rRNA (guanine) methyltransferase activity
    		•  0.425953878527171 bayes_pls_golite062009
  • protein binding
    		•  0.303628351374506 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle