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Protein Overview: cib-PC

General Information:
Name(s) found: cib-PC / FBpp0070608 [FlyBase]
Description(s) found:
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  • gi|24639628|ref|NP_726909.1| ciboulot, isoform C [Drosophila melanogaster] [NCBI NR]
  • gi|22831662|gb|AAN09116.1| ciboulot, isoform C [Drosophila melanogaster] [NCBI NR]
  • The gene ciboulot is referred to in FlyBase by the symbol Dmel\cib (CG4944, FBgn0026084). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:4000148..4005014. It has the cytological map location 4A5. There is experimental evidence that it has the molecular function</span>: actin monomer binding. There is experimental evidence that it is involved in the biological process</span>: larval central nervous system remodeling; brain development. 18 alleles are reported. The phenotypes of these alleles are annotated with: mushroom body beta-lobe; ellipsoid body. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • >CG4944-PC translation from_gene[CG4944 cib FBgn0026084] seq_release:3 mol_weight=10818 cds_boundaries:(X:3,850,305..3,850,819[+]) aa_length:97 transcript_info:[CG4944-RC seq_release:3] gene_info:[gene symbol:cib FBgn0026084 gene_boundaries:(X:3,846,73 [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q8IRS7) CG4944-PC [DrosMelano7227.FASTAC.txt]
  • CG4944-PC, isoform C [Drosophila melanogaster]gi|24639628|ref|NP_726909.1| CG4944-PC [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=X:join(4003722..4003857,4003930..4004043,4004196..4004239); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN091 [fly-100309-contam.fasta]
  • CG4944-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ciboulot CG4944-PC, isoform C [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=X:join(4003722..4003857,4003930..4004043,4004196..4004239); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=X:join(4003722..4003857,4003930..4004043,4004196..4004239); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Ciboulot, isoform C OS=Drosophila melanogaster GN=cib PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=X:join(4003722..4003857,4003930..4004043,4004196..4004239); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116,FlyMine:FBpp0070608,modMine:FBpp0070608; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=X:join(4109689..4109824,4109897..4110010,4110163..4110206); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116,FlyMine:FBpp0070608,modMine:FBpp0070608; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=X:join(4109689..4109824,4109897..4110010,4110163..4110206); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116,FlyMine:FBpp0070608,modMine:FBpp0070608; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Isoform of O97428, Ciboulot, isoform C OS=Drosophila melanogaster GN=cib PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0070608 type=protein; loc=X:join(4109689..4109824,4109897..4110010,4110163..4110206); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116,FlyMine:FBpp0070608,modMine:FBpp0070608; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=X:join(4109689..4109824,4109897..4110010,4110163..4110206); ID=FBpp0070608; name=cib-PC; parent=FBgn0026084,FBtr0070640; dbxref=FlyBase:FBpp0070608,FlyBase_Annotation_IDs:CG4944-PC,GB_protein:AAN09116.1,REFSEQ:NP_726909,GB_protein:AAN09116,UniProt/TrEMBL:Q8IRS7,FlyMine:FBpp0070608,modMine:FBpp0070608; MD5=e1d1c491709eb451c9e73eba63a9e04c; length=97; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 97 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: cytoskeleton organization [IEA]
    brain development [IMP]
    larval central nervous system remodeling [IMP]
    Molecular Function: actin binding [ISS]
    actin monomer binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAPALKD LPKVAENLKS QLEGFNQDKL KNASTQEKII LPTAEDVAAE KTQQSIFEGI  60
   61 TAFNQNNLKH TETNEKNPLP DKEGEGEESV HRRHREL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle