YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG3091-PA, FBpp0...

General Information:
Name(s) found: FBpp0309619 [FlyBase]
CG3091-PA / FBpp0070400 [FlyBase]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • type=protein; loc=X:complement(2146629..2146698,2146757..2146893,2146949..2147281,2147350..2147431,2147484..2147643,2147991..2148120); ID=FBpp0309619; name=CG3091-PC; parent=FBgn0029608,FBtr0342767; dbxref=FlyBase:FBpp0309619,FlyBase_Annotation_IDs:CG3091-PC; MD5=a484b6651ea1d624de2b6c45b3bb4ddb; length=303; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG3091 (CG3091, FBgn0029608). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:2146365..2148163. It has the cytological map location 2F2. Based on sequence similarity, it is predicted to have molecular function</span>: vitamin E binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transport. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: transport [IEA]
    Molecular Function: vitamin E binding [ISS]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKDTGDKDS APETSASPAT GWSDKLTDLV AWFEANPNLP EKIEPIVMLR FLKCTAFDVE  60
   61 RTKALAELNY CMRNKSPHLF MDRNMEDEMT AEGLRVSDLL ILPGVTPQGN KLIFFRMADL 120
  121 DPRTRNSVEE TKIFVMMSDA RFTKPDVERE TGSGADYVLD EADIAEGDVQ IVDIGGYTLR 180
  181 HLAYVSIFVL RVYMKFLQEA YPSRLQAMHV INCPTYLDKL ISMMSPFLRE EVRNMIRYHT 240
  241 EGMDSLYKEV PRDMLPNEYG GKAGTVAELK AKGIQSIRDN AAYLSDERYW KVAAQSKSRW 300
  301 SWF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..303] PSI-BLAST 51.39794 PHOSPHATIDYLINOSITOL TRANSFER PROTEIN SEC14P FROM SACCHAROMYCES CEREVISIAE

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • vitamin E binding
    		•  7.60287756659728 bayes_pls_golite062009
  • retinoid binding
    		•  2.55932836548393 bayes_pls_golite062009
  • isoprenoid binding
    		•  2.50048436206147 bayes_pls_golite062009
  • vitamin binding
    		•  1.77103204070558 bayes_pls_golite062009
  • binding
    		•  1.48494259967762 bayes_pls_golite062009
  • transporter activity
    		•  1.00447017621654 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.658164745879483 bayes_pls_golite062009
  • retinal binding
    		•  0.646905718502968 bayes_pls_golite062009
  • protein binding
    		•  0.408110742195811 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle