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Protein Overview: CG14815-PB

General Information:
Name(s) found: CG14815-PB / FBpp0070352 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG14815 (CG14815, FBgn0023516). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1760865..1763094. It has the cytological map location 2B13. Based on sequence similarity, it is predicted to have molecular function</span>: peroxisome targeting sequence binding. The biological processes in which it is involved are not known. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: peroxisome targeting sequence binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRPLVEGD CGGVNPLMQL GGQFTRDVAH KDEGYVQRHF ERAARPEDQL INEFLGQVTA  60
   61 PPQSFQMDTL LQEMRDINIH GNPQQQMHSQ QAEQWGQDFA RGLAPALPNK MIHMQAQQQD 120
  121 LQHAQEFFDE PLISSQNFRS LPPLRQPLMP IAAGQQQDPF FDSAMETIIT DHLPQAPQGE 180
  181 SLDDWISDYQ RSTEQKEQTA ANFNEKFWER LQDEWQKLAD ENEHPWLSEY NDNMDAYKEY 240
  241 EFAEGNPMSD VENPFEKGKE YLSKGDIPSA VLCFEVAAKK QPERAEVWQL LGTSQTENEM 300
  301 DPQAIAALKR AYDLQPDNQQ VLMALAACYT NEGLQNNAVR MLCNWLTVHP KYQHLVAAHP 360
  361 ELQAEGTSLA SSLIGPSKLR DLQQIYLEAV RQHPSEVDAE VQDALGVLYN LSGEFDKAVD 420
  421 CYQSALQVDP QNAKTWNRLG ASLANGSRSV EAVEAYQQAL QLQPGFIRVR YNVGVCCMNL 480
  481 KAYKEAVEHL LTALTMQAHT NAARELPNAA MAATFRGQNQ MSESIWSTLK MVISLMGRSD 540
  541 LQSYVSDRNL AALNEAFKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] MSA 2.630996 View MSA. No confident structure predictions are available.
    2 View Details [186..496] PSI-BLAST 30.09691 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
    3 View Details [497..559] PSI-BLAST 5.0 Crystal structure of the N-terminal domain of human SMG7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peroxisome targeting sequence binding
    		•  6.28836842401449 bayes_pls_golite062009
  • peroxisome matrix targeting signal-1 binding
    		•  5.30441166392789 bayes_pls_golite062009
  • binding
    		•  2.09193012129784 bayes_pls_golite062009
  • protein binding
    		•  1.52807685989528 bayes_pls_golite062009
  • signal sequence binding
    		•  1.13935627118933 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle