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Protein Overview: FBpp0308661, CG1...

General Information:
Name(s) found: FBpp0308661 [FlyBase]
CG14782-PA / FBpp0070249 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=X:1373272..1374222; ID=FBpp0308661; name=rush-PB; parent=FBgn0025381,FBtr0339589; dbxref=FlyBase:FBpp0308661,FlyBase_Annotation_IDs:CG14782-PB; MD5=a071e30e8e3b599aef55f16a4493432c; length=316; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG14782 (CG14782, FBgn0025381). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:1372585..1375455. It has the cytological map location 2B1. Based on sequence similarity, it is predicted to have molecular function</span>: guanyl-nucleotide exchange factor activity. The biological processes in which it is involved are not known. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    guanyl-nucleotide exchange factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDRLVNSEA NTRRIASVEN CFGSSGVPLA MQGRVLVGEG VLTKMCRKRP KSRQFFLFND  60
   61 ILVYGNIVIG KKKYNKQHIM PLEEVSLESI ADNQTYRNGW YIRTTTKSFV VFAATSTEKQ 120
  121 EWMAHINKCV EDLLRKSGKK PVENHAAVWV PDTDASVCMH CKKTQFTFIQ RRHHCRNCGA 180
  181 VVCAGCSAKK FLLPQQSTKA LRVCDACYER LKHVPSSLGS GEDSAAATGA ASGNKLNTTA 240
  241 GDSSNDEDSD EETASPGGES HDEPRFYGDN SVLSAVEDSS TITSPSSATT GSLEAPQVTP 300
  301 SVQSSPAAVA TTGSHC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 10.69897 Hrs
    2 View Details [214..316] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.679196907806154 bayes_pls_golite062009
  • protein binding
    		•  0.0558754826633389 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle