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Protein Overview: FBpp0298011, TRA...

General Information:
Name(s) found: FBpp0304840 [FlyBase]
FBpp0298011 [FlyBase]
TRAM-PC / FBpp0070164 [FlyBase]
TRAM-PA / FBpp0070163 [FlyBase]
TRAM-PB / FBpp0070162 [FlyBase]
Description(s) found:
Found 61 descriptions.
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  • type=protein; loc=X:830382..831488; ID=FBpp0304840; name=TRAM-PE; parent=FBgn0040340,FBtr0332589; dbxref=REFSEQ:NP_001259115,GB_protein:AGB94961,FlyBase:FBpp0304840,FlyBase_Annotation_IDs:CG11642-PE; MD5=c6803b3e6691c65d4ac0dd4ffe29f1d4; length=368; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=X:830382..831488; ID=FBpp0298011; name=TRAM-PD; parent=FBgn0040340,FBtr0307182; dbxref=REFSEQ:NP_001245456,GB_protein:AFH07171,FlyBase:FBpp0298011,FlyBase_Annotation_IDs:CG11642-PD; MD5=c6803b3e6691c65d4ac0dd4ffe29f1d4; length=368; release=r5.56; species=Dmel; [FlyBase]
  • The gene TRAM is referred to in FlyBase by the symbol Dmel\TRAM (CG11642, FBgn0040340). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:829265..831855. It has the cytological map location 1D2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 12 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene TRAM is referred to in FlyBase by the symbol Dmel\TRAM (CG11642, FBgn0040340). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:829265..831855. It has the cytological map location 1D2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 12 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • The gene TRAM is referred to in FlyBase by the symbol Dmel\TRAM (CG11642, FBgn0040340). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:829265..831855. It has the cytological map location 1D2. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: phagocytosis, engulfment. 12 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 368 amino acids

    Gene Ontology:
    Cellular Component: lipid particle [IDA]
    integral to membrane [IEA]
    endoplasmic reticulum [ISS]
    Biological Process: SRP-dependent cotranslational protein targeting to membrane [ISS]
    phagocytosis, engulfment [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKPGLGRK TSNKNPPILS HEFVIQNHAD IISCVAMVFV VGLMNESTAA FASAFISLHH  60
   61 NVSGEDPSRE QPYGKPYTYI AGIKDYCAIF FYTLTCIIMH AIIQEFVLDK ISKKLHLSKF 120
  121 KLARFNESGQ LVAFYLLSFV WGAHVLLKEG YLGQVAQLWE GFPDHPMSFL HKFYFVVQLA 180
  181 YYLHMLPELY FQKIKTKEEQ QPKIVHSISG FTLIVLAYTL SFQRLALVLL TLHYFSELLS 240
  241 HVFQLIGVFD REERLAKLRV VNNAVFFLIR FATSVIGVLT LYYGIGGVRS LLALGGLIAL 300
  301 QGYLVFSFIT EQLRAKREAK KEAKREAKLA LQTKKPAKTP KDKVKRKKES DLPEADQTSP 360
  361 SPIKQKLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] Pfam 28.21467 No description for PF08390.2 was found. No confident structure predictions are available.
    2 View Details [148..303] Pfam 6.69897 No description for PF03798.7 was found. No confident structure predictions are available.
    3 View Details [304..368] FFAS03 1.2 30S subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle