YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CG13369-PA

General Information:
Name(s) found: CG13369-PA / FBpp0070110 [FlyBase]
Description(s) found:
Found 25 descriptions.
SHOW ALL
  • This gene is referred to in FlyBase by the symbol Dmel\CG13369 (CG13369, FBgn0025640). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is X:517500..518798. It has the cytological map location 1B12. Based on sequence similarity, it is predicted to have molecular function</span>: ribokinase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: D-ribose metabolic process. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 304 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: D-ribose metabolic process [IEA]
    Molecular Function: ribokinase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQTEVLVFG SAIIDFISYT TRLPKAGETL HGHRFQIGYG GKGANQCVAA ARQGSRTALV  60
   61 AKLGADTFGS DYLRHLREER VNVNHVEQLA EETTGVAQIA VSDGGENNII IVVGANNRLS 120
  121 SCDVSSAKAL FQEAKVLVCQ LETPVEATLT ALRAFRGVSI VNAAPAMADT PPELLQLASI 180
  181 FCVNESEAAL MTQMPDIGNI EHAEDAVGKL IAAGANTVII TLGKLGAVFG SADSKGVCQH 240
  241 VAAPSVPPEK VVDTTGAGDA FIGALAHNLA RHPTRKLEEH IAAACAVASQ SVQLPGTQSS 300
  301 FPHA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..304] PSI-BLAST 55.154902 Crystal structure of human ribokinase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ribokinase activity
    		•  4.13972810632318 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  3.53872211951287 bayes_pls_golite062009
  • kinase activity
    		•  2.28531824242987 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.27980720248925 bayes_pls_golite062009
  • transferase activity
    		•  2.15883296431019 bayes_pls_golite062009
  • phosphofructokinase activity
    		•  1.98381934960918 bayes_pls_golite062009
  • catalytic activity
    		•  1.74474587246986 bayes_pls_golite062009
  • binding
    		•  0.867793137678666 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.673555832721854 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle