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Protein Overview: CstF-50-PA

General Information:
Name(s) found: CstF-50-PA / FBpp0085224 [FlyBase]
Description(s) found:
Found 23 descriptions.
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  • The gene CstF-50 is referred to in FlyBase by the symbol Dmel\CstF-50 (CG2261, FBgn0039867). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:27561225..27562664. It has the cytological map location 100D1. Its molecular function is unknown. Based on sequence similarity, it is predicted to be involved in the biological process</span>: mRNA cleavage. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 424 amino acids

    Gene Ontology:
    Cellular Component: mRNA cleavage stimulating factor complex [ISS]
    Biological Process: mRNA cleavage [ISS]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRDEILDPSN LVKNREILYR LMISQLMYDG LEKFAMELSM LVKADQCAPS ERLLHVMIAG  60
   61 MQTLSDKDKT NSDDVLPGID LEFEPEASAL APEPHSYETA YVTSHKQACR AGAFSCDGSL 120
  121 VATGSVDASI KILDVERMLA KSAPEDIEPG REQQGHPVIR TLYDHTDEVS YLEFHPKEHI 180
  181 LASASRDGTV KLFDIAKPSV KKAHKVFTDC EPVLCLSFHP TGDYVAIGTE HNVLRVYDVA 240
  241 TTQCFVSAIP SQQHKAGVTC VKYSPTGKLY ATGSYDGDIK IWDGISGRCI NTIAEAHGGA 300
  301 AICSLEFTRN GKYLLSSGMD SLVYLWELCT SRPIQTYTGA GTTGKQEHQT EAVFNHTEDY 360
  361 VLFPDEATTS LCSWNSRNGC RLTLNSLGHN GPVRYITHSP NGPAFLTCSD DFRARFWYRR 420
  421 ANNQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] deduced N/A No confident structure predictions are available.
    2 View Details [95..424] PSI-BLAST 77.0 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle