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Protein Overview: spn-F-PA

General Information:
Name(s) found: spn-F-PA / FBpp0085122 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene spn-F is referred to in FlyBase by the symbol Dmel\spn-F (CG12114, FBgn0086362). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:27080864..27082388. It has the cytological map location 100B8-100B9. There is experimental evidence that it has the molecular function</span>: minus-end-directed microtubule motor activity. There is experimental evidence that it is involved in the biological process</span>: oocyte axis specification; oocyte microtubule cytoskeleton organization; bristle morphogenesis. 6 alleles are reported. The phenotypes of these alleles are annotated with: embryonic head; egg; macrochaeta; microtubule cytoskeleton; actin tubule; oocyte nucleus; dorsal appendage; embryonic abdominal segment. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oocyte axis specification [IMP]
    bristle morphogenesis [IMP]
    oocyte microtubule cytoskeleton organization [IDA]
    Molecular Function: minus-end-directed microtubule motor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEASAAKITP MASSMSASGS TNSPSSEKMN YALQVALQTI KERCIQLQRR VASMEEENQQ  60
   61 LREASSRSEG APRANEIGVT GDVLSLKAQV SELQRQKEQL EEHIGMVSNE NRRLWSRLSQ 120
  121 ISKDQQLNAL PSSTDSRAQQ NQNLVRSKTF TQHSPNPHLR QKMLSDGIKD LSLEEIALDD 180
  181 FGASSEELGY PYNLQKVEET TSEPDANVDA KRCLDGLQEL RREAMKQQQE LRSVMTLLEN 240
  241 RIALKPCPEC AQKTIKKPEM ADKSLETDDS LTSELKNYES QHNGHNGTPP SQRINIIQEK 300
  301 IKADAADAME KTCPMCGKQY SSQVSFNAFR EHVEMHFIDD ALELESENSI ERQFEFVSHA 360
  361 VGDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..283] FFAS03 1.05 STAT3b
    2 View Details [284..364] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.70

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle