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Protein Overview: CG1750-PB

General Information:
Name(s) found: CG1750-PB / FBpp0085130 [FlyBase]
Description(s) found:
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  • gi|28571984|ref|NP_788772.1| CG1750, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|28381518|gb|AAO41619.1| CG1750, isoform B [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG1750 (CG1750, FBgn0039836). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:27079373..27080622. It has the cytological map location 100B8. Based on sequence similarity, it is predicted to have molecular function</span>: methionyl-tRNA formyltransferase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: translation. 6 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG1750-PB translation from_gene[CG1750 CG1750 FBgn0039836] seq_release:3 mol_weight=32916 cds_boundaries:(3R:27,068,750..27,069,746[-]) aa_length:295 transcript_info:[CG1750-RB seq_release:3] gene_info:[gene symbol:CG1750 FBgn0039836 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q86B68) CG1750-PB [DrosMelano7227.FASTAC.txt]
  • CG1750-PB, isoform B [Drosophila melanogaster]gi|28571984|ref|NP_788772.1| CG1750-PB [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(27079381..27079745,27079801..27079963,27080021..27080380); ID=FBpp0085130; name=CG1750-PB; parent=FBgn0039836,FBtr0085768; dbxref=FlyBase:FBpp0085130,FlyBase_Annotation_IDs:CG1750-PB,GB_protein:AAO41619.1,REFSEQ:NP_788772,G [fly-100309-contam.fasta]
  • CG1750-PB, isoform B [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(27079381..27079745,27079801..27079963,27080021..27080380); ID=FBpp0085130; name=CG1750-PB; parent=FBgn0039836,FBtr0085768; dbxref=FlyBase:FBpp0085130,FlyBase_Annotation_IDs:CG1750-PB,GB_protein:AAO41619.1,REFSEQ:NP_788772,GB_protein:AAO41619; MD5=1da41247fda986751f75870086d76056; length=295; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(27079381..27079745,27079801..27079963,27080021..27080380); ID=FBpp0085130; name=CG1750-PB; parent=FBgn0039836,FBtr0085768; dbxref=FlyBase:FBpp0085130,FlyBase_Annotation_IDs:CG1750-PB,GB_protein:AAO41619.1,REFSEQ:NP_788772,GB_protein:AAO41619; MD5=1da41247fda986751f75870086d76056; length=295; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG1750, isoform B OS=Drosophila melanogaster GN=CG1750 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
    • Organism: Drosophila melanogaster
    Length: 295 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEA]
    Molecular Function: methionyl-tRNA formyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNWINKNIF LSDRLGVVTS FKSPANCVRT YAEKEKLPLQ KWPIDPSVCP QFDLGVVVSF  60
   61 GHLIPGSIIN GFPYGMINVH ASLLPKWRGA APIIYAIMKG DASTGVSIMK IEPHRFDIGD 120
  121 ILAQREVAIN PDVFMPDLHA SLASLGAELL VDTINNLSVR LKEAKPQDSS RVSYAPKITS 180
  181 KITEIIWSEL SAIEIYTRHR ALYGYKNLTT NFLGKQVQLL ELRLPEKRVP VQEPGAISYL 240
  241 RKSRSLIIGC AQQSQLEVLQ LRVEGRKPMS AQDFNNGFLK QARSLSFTEN KIASI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..295] PSI-BLAST 84.69897 Methionyl-tRNAfmet formyltransferase, C-terminal domain; Methionyl-tRNAfmet formyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydroxymethyl-, formyl- and related transferase activity
    		•  5.69633962913959 bayes_pls_golite062009
  • methionyl-tRNA formyltransferase activity
    		•  5.65386414092027 bayes_pls_golite062009
  • methyltransferase activity
    		•  2.76628443233732 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  2.70337357342253 bayes_pls_golite062009
  • catalytic activity
    		•  2.53047786804923 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  2.44659532474253 bayes_pls_golite062009
  • ligase activity
    		•  1.96240394924455 bayes_pls_golite062009
  • transferase activity
    		•  1.21569993951472 bayes_pls_golite062009
  • DNA N-glycosylase activity
    		•  0.44549344555131 bayes_pls_golite062009
  • phosphoribosylglycinamide formyltransferase activity
    		•  0.274274040236549 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing N-glycosyl compounds
    		•  0.260905445900329 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle