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Protein Overview: ocn-PA

General Information:
Name(s) found: ocn-PA / FBpp0084964 [FlyBase]
Description(s) found:
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  • gi|8571372|gb|AAF76852.1|AF231190_1 ocnus [Drosophila melanogaster] [NCBI NR]
  • gi|7301887|gb|AAF56995.1| ocnus [Drosophila melanogaster] [NCBI NR]
  • gi|5052484|gb|AAD38572.1|AF145597_1 BcDNA.GH02250 [Drosophila melanogaster] [NCBI NR]
  • gi|17864098|ref|NP_524578.1| ocnus [Drosophila melanogaster] [NCBI NR]
  • The gene ocnus is referred to in FlyBase by the symbol Dmel\ocn (CG7929, FBgn0041102). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25862717..25863452. It has the cytological map location 99D3. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG7929-PA translation from_gene[CG7929 ocn FBgn0041102] seq_release:3 mol_weight=16887 cds_boundaries:(3R:25,852,181..25,852,733[-]) aa_length:148 transcript_info:[CG7929-RA seq_release:3] gene_info:[gene symbol:ocn FBgn0041102 gene_boundaries:(3R:25, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9Y170) BCDNA:GH02250 protein (OCNUS) [DrosMelano7227.FASTAC.txt]
  • (AE003772) ocn gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG7929-PA [Drosophila melanogaster]gi|17864098|ref|NP_524578.1| CG7929-PA [Drosophila melanogaster]gi|5052484|gb|AAD38572.1| BcDNA.GH02250 [Drosophila melanogaster]gi|8571372|gb|AAF76852.1| ocnus [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(25862812..25862922,25862978..25863102,25863157..25863367); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_p [fly-100309-contam.fasta]
  • CG7929-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ocnus [Drosophila melanogaster] [nr-271106-contam.fasta]
  • BcDNA.GH02250 [Drosophila melanogaster] [nr-271106-contam.fasta]
  • ocnus CG7929-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(25862812..25862922,25862978..25863102,25863157..25863367); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(25862812..25862922,25862978..25863102,25863157..25863367); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • BcDNA.GH02250 OS=Drosophila melanogaster GN=ocn PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(25862812..25862922,25862978..25863102,25863157..25863367); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995,FlyMine:FBpp0084964,modMine:FBpp0084964; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • BcDNA.GH02250 OS=Drosophila melanogaster GN=ocn PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(join(30037435..30037645,30037256..30037380,30037090..30037200)); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995,FlyMine:FBpp0084964,modMine:FBpp0084964; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(join(30037435..30037645,30037256..30037380,30037090..30037200)); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995,FlyMine:FBpp0084964,modMine:FBpp0084964; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084964 type=protein; loc=3R:complement(join(30037435..30037645,30037256..30037380,30037090..30037200)); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995,FlyMine:FBpp0084964,modMine:FBpp0084964; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(join(30037435..30037645,30037256..30037380,30037090..30037200)); ID=FBpp0084964; name=ocn-PA; parent=FBgn0041102,FBtr0085599; dbxref=FlyBase:FBpp0084964,FlyBase_Annotation_IDs:CG7929-PA,GB_protein:AAF56995.1,REFSEQ:NP_524578,GB_protein:AAF56995,UniProt/TrEMBL:Q9Y170,FlyMine:FBpp0084964,modMine:FBpp0084964; MD5=6ed86c0b599f932e77fe03ced3f544d8; length=148; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 148 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLNLLAPV SQLLKPLRRQ SSSRVNALLI NVPRVQLSKG KNKYLLMMIH MHGLTRFGRT  60
   61 IVRGSASKDH EEIFEEIQKE MDKIGICAKC LGGGFISNKE DKKVMKIYGC CKTFGEAPHG 120
  121 RTKDILLSWT KFQHYNIILP KKNLNAYQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 40.522879 No description for 2ai6A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.575856086979549 bayes_pls_golite062009
  • protein binding
    		•  0.194429269874431 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle