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Protein Overview: CG18110-PA, FBpp...

General Information:
Name(s) found: FBpp0304714 [FlyBase]
CG18110-PA / FBpp0084815 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • type=protein; loc=3R:join(25494880..25494995,25495100..25495664,25495729..25495878,25495932..25496130,25496193..25496429,25496488..25496594); ID=FBpp0304714; name=ppk30-PB; parent=FBgn0039677,FBtr0332441; dbxref=FlyBase:FBpp0304714,FlyBase_Annotation_IDs:CG18110-PB,REFSEQ:NP_001263076,GB_protein:AGB96456; MD5=d94db0b44412a80cdf1639fcaf02fd85; length=457; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG18110 (CG18110, FBgn0039677). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25494871..25496972. It has the cytological map location 99B7. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: sodium channel activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: sodium ion transport. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEA]
    Biological Process: sodium ion transport [IEA]
    Molecular Function: sodium channel activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATAWKPEP SSEDNDDDHK ESKKKLKKEG AGGWASTRRY ARIPLKIMAA LATVYVSILS  60
   61 SERYFYYWVQ TSIERTDMHV SEIDFPAVTI IPINLSILKA EKLSKAYNLV QSVVWQTPMS 120
  121 ARLTDENFTE FSELENWNAQ SWGIYQALQM NCQHFFTECQ WRRKAMNCCD LFRPTKTFNG 180
  181 FAFEFNSLVS SGRDETWPWS VASCGSYSGL NVKIKRQQGL YTLNTMGVIV HEPTQLLGMS 240
  241 IDYSSEDRIV VPVEPLHFTA ELDVRARPVQ MRRCYFENEI PTGKSRSECI YKCHVNYIIS 300
  301 KCNCSLELPV KATQDEDNIA AAKESNGRRI CGVKDLACFN QHRLSLFSMS NIIEESRDNV 360
  361 FSTVDCGCFP QCGHTQYHTS TYTEKMSAHT NLAAAIEIDV YFQEETLFSY RSMLRFTLID 420
  421 LMVSYGGIAG LIMGISVLGC INELLDRFAC CRIPHGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..457] PSI-BLAST 87.522879 No description for 2qtsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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