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Protein Overview: Brd8-PA

General Information:
Name(s) found: Brd8-PA / FBpp0084763 [FlyBase]
Description(s) found:
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  • gi|7301767|gb|AAF56879.1| Brd8 [Drosophila melanogaster] [NCBI NR]
  • gi|24651006|ref|NP_651685.2| Brd8 [Drosophila melanogaster] [NCBI NR]
  • The gene Brd8 is referred to in FlyBase by the symbol Dmel\Brd8 (CG14514, FBgn0039654). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:25049213..25051998. It has the cytological map location 99A1. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: negative regulation of gene expression. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG14514-PA translation from_gene[CG14514 CG14514 FBgn0039654] seq_release:3 mol_weight=94152 cds_boundaries:(3R:25,038,658..25,041,273[+]) aa_length:872 transcript_info:[CG14514-RA seq_release:3] gene_info:[gene symbol:CG14514 FBgn0039654 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VAM5) CG14514 protein [DrosMelano7227.FASTAC.txt]
  • (AE003768) CG14514 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG14514-PA [Drosophila melanogaster]gi|24651006|ref|NP_651685.2| CG14514-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:25049292..25051910; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879; MD5=218750383968723ab691f10def3 [fly-100309-contam.fasta]
  • Brd8 CG14514-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG14514-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:25049292..25051910; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879; MD5=218750383968723ab691f10def391cf4; length=872; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:25049292..25051910; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879; MD5=218750383968723ab691f10def391cf4; length=872; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • Brd8 OS=Drosophila melanogaster GN=Brd8 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:25049292..25051910; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879,FlyMine:FBpp0084763,modMine:FBpp0084763; MD5=218750383968723ab691f10def391cf4; length=872; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • Brd8 OS=Drosophila melanogaster GN=Brd8 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:29223570..29226188; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879,FlyMine:FBpp0084763,modMine:FBpp0084763; MD5=218750383968723ab691f10def391cf4; length=872; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:29223570..29226188; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879,FlyMine:FBpp0084763,modMine:FBpp0084763; MD5=218750383968723ab691f10def391cf4; length=872; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084763 type=protein; loc=3R:29223570..29226188; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879,FlyMine:FBpp0084763,modMine:FBpp0084763; MD5=218750383968723ab691f10def391cf4; length=872; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:29223570..29226188; ID=FBpp0084763; name=Brd8-PA; parent=FBgn0039654,FBtr0085394; dbxref=FlyBase:FBpp0084763,FlyBase_Annotation_IDs:CG14514-PA,GB_protein:AAF56879.1,REFSEQ:NP_651685,GB_protein:AAF56879,UniProt/TrEMBL:Q9VAM5,FlyMine:FBpp0084763,modMine:FBpp0084763; MD5=218750383968723ab691f10def391cf4; length=872; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 872 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of gene expression [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAGVQERLQ LSRMPLDTWS KREQLILASA VSCSGDQNWI TVSRTLKTIC GNGSSNRPAD  60
   61 WFSQKNCAMQ YGNLLESVEA TKRKKRSSES SAGVSSPATV ETPTELLLRR LTEERQAEIK 120
  121 AQMRQDQETY RRIQREIESL QSDAVTEQEL QDMWLEIEKE QEARRIEEMK LENRMREREQ 180
  181 RKKDLASNWR NSSLAVKRSN QAADTTSVDM DVEDINTSGN GKQQTGPSPL LTSLLKSPTG 240
  241 NAPATPTPGG AAPAAGGTGS VARATAPTIT SLLTSGPSSA VANQPVITMK SPTDAAFMSR 300
  301 PITGPPASEA STTPTLERSP SQAAPTLSML LEKNMAAAKA NESGSLVKPE GSGNQEQGVD 360
  361 EATSSAAGTA DSDEADPNEA QLLEVFKNID QIIDDIDIDM ASVIDDEILK NVDDVVASPS 420
  421 NDKAEVIDFE DKLDALKREQ SKSSPASDKP KSVELVIGSS DDSNDNIPLA AVASQESKDR 480
  481 GQSGGESTRG TEDAESEPLT SEVAVEEIGE TITIISTSSE DTAGSPPTKM EEDGATDSLP 540
  541 KKEDAAEDKS EQESSSQGQN KAGGSTDEPE LIDHQATREA QSKSGKDTAG KPVTMQEKTT 600
  601 TQSAPVPVDL HDTDEESSSL TDSSKHDDHP RSAKAKPPAL KLALDDSKSE LELSGTPQPP 660
  661 SAPARTPLLR KLPHRDRSES PMVDDDATTA SDHSTARSTR RRCSSTPVID SIPNSPASSE 720
  721 HTDDRRETRA ASKKLFLSIY AMLLDSKHAA PFKRPFHDEH AQRHADLCLR PMDFPTIKRN 780
  781 IDSGFIRSLS ELHRDVLLMA HNVLVAYKPH TAQHKTARLF VQDCQAIKEF SQLPDVQAGI 840
  841 TATPVSNTGS LRADKSSGSK ARSGSRKSQR HH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] MSA 4.291997 View MSA. No confident structure predictions are available.
    2 View Details [199..453] deduced N/A No confident structure predictions are available.
    3 View Details [454..669] deduced N/A No confident structure predictions are available.
    4 View Details [670..872] PSI-BLAST 25.69897 No description for 2f6jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle