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Protein Overview: Cpsf100-PA

General Information:
Name(s) found: Cpsf100-PA / FBpp0084726 [FlyBase]
Description(s) found:
Found 22 descriptions.
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  • The gene Cleavage and polyadenylation specificity factor 100 is referred to in FlyBase by the symbol Dmel\Cpsf100 (CG1957, FBgn0027873). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24860325..24862784. It has the cytological map location 98F5. It is reported to have molecular function</span>: mRNA 3'-UTR binding. There is experimental evidence that it is involved in the biological process</span>: histone mRNA 3'-end processing. 4 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 756 amino acids

    Gene Ontology:
    Cellular Component: mRNA cleavage and polyadenylation specificity factor complex [ISS]
    Biological Process: histone mRNA 3'-end processing [IMP]
    mRNA polyadenylation [ISS][NAS]
    mRNA cleavage [ISS][NAS]
    Molecular Function: mRNA 3'-UTR binding [NAS]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSIIKLHTI SGAMDESPPC YILQIDDVRI LLDCGWDEKF DANFIKELKR QVHTLDAVLL  60
   61 SHPDAYHLGA LPYLVGKLGL NCPIYATIPV FKMGQMFMYD LYMSHFNMGD FDLFSLDDVD 120
  121 TAFEKITQLK YNQTVSLKDK GYGISITPLN AGHMIGGTIW KIVKVGEEDI VYATDFNHKK 180
  181 ERHLSGCELD RLQRPSLLIT DAYNAQYQQA RRRARDEKLM TNILQTVRNN GNVLIAVDTA 240
  241 GRVLELAHML DQLWKNKESG LMAYSLALLN NVSYNVIEFA KSQIEWMSDK LTKAFEGARN 300
  301 NPFQFKHIQL CHSLADVYKL PAGPKVVLAS TPDLESGFTR DLFVQWASNA NNSIILTTRT 360
  361 SPGTLAMELV ENCAPGKQIE LDVRRRVDLE GAELEEYLRT QGEKLNPLIV KPDVEEESSS 420
  421 ESEDDIEMSV ITGKHDIVVR PEGRHHSGFF KSNKRHHVMF PYHEEKVKCD EYGEIINLDD 480
  481 YRIADATGYE FVPMEEQNKE NVKKEEPGIG AEQQANGGIV DNDVQLLEKP TKLISQRKTI 540
  541 EVNAQVQRID FEGRSDGESM LKILSQLRPR RVIVIHGTAE GTQVVARHCE QNVGARVFTP 600
  601 QKGEIIDVTS EIHIYQVRLT EGLVSQLQFQ KGKDAEVAWV DGRLGMRVKA IEAPMDVTVE 660
  661 QDASVQEGKT LTLETLADDE IPIHNSVLIN ELKLSDFKQT LMRNNINSEF SGGVLWCSNG 720
  721 TLALRRVDAG KVAMEGCLSE EYYKIRELLY EQYAIV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..462] PSI-BLAST 77.221849 No description for 2i7tA was found.
    2 View Details [463..659] FFAS03 3.73 No description for 2i7xA was found.
    3 View Details [660..756] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle