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Protein Overview: CG5514-PA, CG5514-PC

General Information:
Name(s) found: CG5514-PC / FBpp0290366 [FlyBase]
CG5514-PA / FBpp0084621 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5514 (CG5514, FBgn0039560). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23763967..23768500. It has the cytological map location 98B6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: structural constituent of cell wall. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5514 (CG5514, FBgn0039560). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23763967..23768500. It has the cytological map location 98B6. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: structural constituent of cell wall. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1109 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDFIKTLIA EVKSQGVFDE FRFNCCLADV DTKPAYQNVR TQVETAVNDF LAKQQWTPET  60
   61 NKVQLRERLR KHLMDSDVLD KGVDQIVDQV VNPKVATIFE PKIESIVYKY LGITPPARPT 120
  121 MLSAPPLPPF GAHLNGSSLL NVETTVGLLP TDLEQISPDS DRATVKSESR DDELPPGVDD 180
  181 EDTSPSYELV SERKTLAIKE ELNNVSLNNS DSVNGVSQAS QLSQVSSDSR LTMASSTESM 240
  241 VDSHQHTAAH NSGEPENICE EAQMPKFSEN SWDASAGTGR SEGRQLHFDI KQDAITFEGT 300
  301 ERKNSVSETT STGLQILSIE DEIMSEVKAN IDDANNASIE SIAPEPVQVP APPKVNPPPP 360
  361 PRPASPKVEP PPPAPPGVES PPGPQPPASP RFDPPPPHTI EPPPPPAPPT LVPPPPPAPP 420
  421 TIKPPPPPAP PTVEPPPPPP PAPPTVEPPP PPPPAPTKVE PPPPPAPAEV EPPPPPAPTE 480
  481 LEPPPPPAPP KVELPPPPAP PKAEAAITPR RAKGSNGFIT ELAVTPKESE TRDKPHNVNT 540
  541 DVKEDEQPAT TEDKQDKPLE LGLDAPKDAV STASESTESP TSTSSQSKSH SKSRDKEKEK 600
  601 DRRHHRHSDD KHRRRSTDRD RDRSRDKSHS KHSSSSSSKH SSSNSSSSKH KSSSSKNDKS 660
  661 SSSSSSRSNR ESSSSKRSGT TSSSRHESSS HKKHKSSSSS SRSERDKGKE KDKEREKDSQ 720
  721 SRSHHSSSSS SSSSRRKDHD RGRDRDRNKS NTSGSAENKA IHDDHSESKE KYKQRRGSDS 780
  781 NDEGKPPSSG GPAKNSQPED SAATMKSDAP VENANGTNGN SNGSTNGACD NVSGVVIVSD 840
  841 ILQQSTSSFV ELTAGSQSHD RAESSKHEPE DIDGKEADNQ PEKTELEARQ DECASQNEVP 900
  901 TVEPQTLADS VPDLPAKESM DTLEDEKVET NVEENKSEEE SKPENPPEEC VDEPAQVGDV 960
  961 EDPPQDADKP ATPVPISNEQ SDEFSADFVT HFEENTDEFR TRLQLINQLI EDRKNLLNRL1020
 1021 SEDGTQEEAV DIRALRRSLS KRRRSSMQEQ HRVERETTPP QPRSPSSSST AGSPAKRLRQ1080
 1081 DEPKSSPTPS DASINSKENE ALEKQEHAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..143] MSA 1.142977 View MSA. No confident structure predictions are available.
    2 View Details [144..339] deduced N/A No confident structure predictions are available.
    3 View Details [340..537] deduced N/A No confident structure predictions are available.
    4 View Details [538..659] deduced N/A No confident structure predictions are available.
    5 View Details [660..849] deduced N/A No confident structure predictions are available.
    6 View Details [850..1109] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle