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Protein Overview: gi|24650714, gi|...

General Information:
Name(s) found: gi|7301627 [NCBI NR]
gi|24650714 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|7301627|gb|AAF56745.1| CG12877, isoform A [Drosophila melanogaster] [NCBI NR]
  • gi|24650714|ref|NP_651584.1| CG12877, isoform A [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1010 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    exonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSTGLFKG FLCPYFDGQD AASCKRPFCH FKHARKDELE AAPPAEPSPV PKYKPAPKLL  60
   61 SLPLPQITLC APRKKSNLEY HPEKPALDAS PAKKKQEASV DSAPKYVPGQ PSVTNGEEYD 120
  121 DWQAVLEKEI DEQMQVEIEE QVQNNDEEQK IDTVAENEED QENTQLTDAR DSHEKDRKPS 180
  181 KERERDIEKK KIRELKREKI KDRDRDRDRD REKDKEKSKE RDREKEKNDR DKRKSSHSDK 240
  241 ERSKERNTSS SSSSKHKSSS SSSSSKKSSS SDKHRDDKSS SSRHKSSSSS SSSKSHHHKS 300
  301 SSSSSRSKTK RSSSSSKSAG TSKSEPEADK DTEAAVLTPA EPMDDLDDMD FDFEADTSEG 360
  361 EIVRQCEMIF DEMEKKFAQM HKDEGGNANP ESSRKRKAPS PDIDTFTEAA TAALQKRRVA 420
  421 HENADKITPH LAPSAAMRKP NHVRNAMQAI FNRRAELRRQ EKLQAEASAE QVRQAQERVR 480
  481 QAQEELRQAK VNSNLTPLIS RSALTPPVRS ARSIAPVANI VAIARAKKKI EELQAEKKPA 540
  541 FTPAQSFKGA GRVAHKPTAA LDKAAPVSNA EKPTVLDPSS SKISYNVRIQ YYEMMVRHCT 600
  601 VIYPQLADAW ERAQVEELTV FKKCNTPAIY KNSCMLAINK LRKEALEAGN KPSVACKTVS 660
  661 HEMMLGGKRA LTTSWSVEKK GKLSSLGNGE PFDALDAEKA YKMVFDLRLT EEQLVENGYP 720
  721 RPGDKRGSAV IRACRPNRRP NQKERYCSRC GKVFSLDIYE HQSFDMCNYH PKSTGYRRGF 780
  781 TDHQHRCCQQ PAGTPGCTYA NYHVSDYYDP EKLTCFVKTI ERGEEFVPTK KDIYALDCEM 840
  841 CYTTHGIELT RVTVVDINGR SVYDALVKPD NQIVDYNTTW VNVAFRLFRI NLQYSDFSYS 900
  901 GITEAMLSNE TRTIRDVQAV LMSMFHAKTV LVGHSLESDL KALKLIHDVV VDTSVLFPHK 960
  961 MGPPKKRALK TLCIENLKRI IQESEAGHDS AEDAEVCIQL IKYYLRNKIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..432] PSI-BLAST 19.69897 Heavy meromyosin subfragment
    2 View Details [433..519] deduced N/A No confident structure predictions are available.
    3 View Details [520..807] FFAS03 1.03 RNA polymerase II-TFIIS complex
    4 View Details [808..1010] PSI-BLAST 44.39794 human ISG20

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • catalytic activity
    		•  0.485910322334531 bayes_pls_golite062009
  • nuclease activity
    		•  0.318985867549147 bayes_pls_golite062009
  • hydrolase activity
    		•  0.278122673215692 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.251364069223802 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle