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Protein Overview: gi|24650716, gi|...

General Information:
Name(s) found: gi|24650716 [NCBI NR]
gi|23172468 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|24650716|ref|NP_733234.1| CG12877, isoform B [Drosophila melanogaster] [NCBI NR]
  • gi|23172468|gb|AAN14129.1| CG12877, isoform B [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 956 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    exonuclease activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPSTGLFKG FLCPYFDGQD AASCKRPFCH FKHARKDELE AAPPAEPSPV PKYKPAPKLL  60
   61 SLPLPQITLC APRKKSNLEY HPEKPALDAS PAKKKQEASV DSAPKYVPGQ PSVTNGEEYD 120
  121 DWQAVLEKEI DEQMQVEIEE QVQNNDEEQK IDTVAENEED QENTQLTDAR DSHEKDRKPS 180
  181 KERERDIEKK KIRELKREKI KDRDRDRDRD REKDKEKSKE RDREKEKNDR DKRKSSHSDK 240
  241 ERSKERNTSS SSSSKHKSSS SSSSSKKSSS SDKHRDDKSS SSRHKSSSSS SSSKSHHHKS 300
  301 SSSSSRSKTK RSSSSSKSAG TSKSEPEADK DTEAAVLTPA EPMDDLDDMD FDFEAATAAL 360
  361 QKRRVAHENA DKITPHLAPS AAMRKPNHVR NAMQAIFNRR AELRRQEKLQ AEASAEQVRQ 420
  421 AQERVRQAQE ELRQAKVNSN LTPLISRSAL TPPVRSARSI APVANIVAIA RAKKKIEELQ 480
  481 AEKKPAFTPA QSFKGAGRVA HKPTAALDKA APVSNAEKPT VLDPSSSKIS YNVRIQYYEM 540
  541 MVRHCTVIYP QLADAWERAQ VEELTVFKKC NTPAIYKNSC MLAINKLRKE ALEAGNKPSV 600
  601 ACKTVSHEMM LGGKRALTTS WSVEKKGKLS SLGNGEPFDA LDAEKAYKMV FDLRLTEEQL 660
  661 VENGYPRPGD KRGSAVIRAC RPNRRPNQKE RYCSRCGKVF SLDIYEHQSF DMCNYHPKST 720
  721 GYRRGFTDHQ HRCCQQPAGT PGCTYANYHV SDYYDPEKLT CFVKTIERGE EFVPTKKDIY 780
  781 ALDCEMCYTT HGIELTRVTV VDINGRSVYD ALVKPDNQIV DYNTTWVNVA FRLFRINLQY 840
  841 SDFSYSGITE AMLSNETRTI RDVQAVLMSM FHAKTVLVGH SLESDLKALK LIHDVVVDTS 900
  901 VLFPHKMGPP KKRALKTLCI ENLKRIIQES EAGHDSAEDA EVCIQLIKYY LRNKIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..400] PSI-BLAST 12.522879 Heavy meromyosin subfragment
    2 View Details [401..744] FFAS03 1.04 RNA polymerase II-TFIIS complex
    3 View Details [745..956] PSI-BLAST 52.09691 human ISG20

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.485910322334531 bayes_pls_golite062009
  • nuclease activity
    		•  0.318985867549147 bayes_pls_golite062009
  • hydrolase activity
    		•  0.278122673215692 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.251364069223802 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle