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Protein Overview: CG5987-PA

General Information:
Name(s) found: CG5987-PA / FBpp0084550 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5987 (CG5987, FBgn0039501). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:23073949..23076729. It has the cytological map location 97E11. Based on sequence similarity, it is predicted to have molecular function</span>: tubulin-tyrosine ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 720 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: tubulin-tyrosine ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKNSKFFK RIQELRHFSK EKIRKDREKR THVVRALDMA LNEQPCLDRE WFSPEQSPPL  60
   61 QPMSPRRRMK KTRCLKRRTA ADKQVDDNSP YYGPSSGENS PMPAEEAKLQ GFIQLNNKTY 120
  121 RVECPTRVLN PPMNVDEERP ASETKSTICV SNSRYAMIGK ISKTLGYKLV KESKMWNILW 180
  181 SDSFPGVELF KNMKRFQQIN HFPGMIEICR KDLLSRNLNR MLKIFPQDYK IFPKTWMLPA 240
  241 DYGDAMNYAL NHKRTFILKP DSGAQGRGIW LTNDLKTIGP HERLICQTYI HRPLLIDGYK 300
  301 FDLRVYTLIT SVDPLRIFVY NEGLARFATN KYVEPTPGNA NDLYMHLTNY SVNKRNSHYE 360
  361 LCDNDDCGSK RKLSAINNWM RRHNYDVEEF WSNVDDVIIK TVLSAWPVLK HNYHACFPGH 420
  421 DKIQACFEIL GFDILVDWKL KPYILEVNHS PSFHTNEQVD REVKRPLIRD TLNLVSTVLA 480
  481 DKRQILKEDR KRVKQRLLKI RGDPPVQRPR LGGGTSKPKI DAQKGSPDAQ PVDVEPEAED 540
  541 HGPLAQQIAW EESHLGNFRK IMPPPDLSKL DYYTRFYAQS HQVSIFAETA ASKKREDLAR 600
  601 KMRIQLEEKK AKQQQMLNGK AKRDARKRHT VLLPRAVREK NRINFFRLRE NWSPGFISDA 660
  661 EERLRHTWLH MRAEAIRTLK ITENIYSNLY ETGLLTNTDM VVYPHLYHNL QHGYDIKRTP 720
  721

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..524] FFAS03 1.33 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP
    2 View Details [525..641] MSA 4.166992 View MSA. No confident structure predictions are available.
    3 View Details [642..720] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39206505549131 bayes_pls_golite062009
  • ligase activity
    		•  0.397494692136733 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle