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Protein Overview: FBpp0307705, T48-PA

General Information:
Name(s) found: FBpp0307705 [FlyBase]
T48-PA / FBpp0084437 [FlyBase]
Description(s) found:
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  • gi|7301515|gb|AAF56637.1| transcript 48 [Drosophila melanogaster] [NCBI NR]
  • gi|24650431|ref|NP_524522.2| transcript 48 [Drosophila melanogaster] [NCBI NR]
  • gi|21430070|gb|AAM50713.1| GM18993p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:join(22709678..22709945,22735198..22736189); ID=FBpp0307705; name=T48-PB; parent=FBgn0004359,FBtr0336724; dbxref=FlyBase:FBpp0307705,FlyBase_Annotation_IDs:CG5507-PB,REFSEQ:NP_001262999,GB_protein:AGB96379; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r5.56; species=Dmel; [FlyBase]
  • The gene Transcript 48 is referred to in FlyBase by the symbol Dmel\T48 (CG5507, FBgn0004359). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22707456..22736719. It has the cytological map location 97D5-97D7. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: ventral furrow formation. 18 alleles are reported. The phenotype of these alleles is annotated with: ventral furrow. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG5507-PA translation from_gene[CG5507 T48 FBgn0004359] seq_release:3 mol_weight=46211 cds_boundaries:(3R:22,699,043..22,725,551[+]) aa_length:419 transcript_info:[CG5507-RA seq_release:3] gene_info:[gene symbol:T48 FBgn0004359 gene_boundaries:(3R:22, [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBA5) T48 protein (GM18993p) [DrosMelano7227.FASTAC.txt]
  • (AE003758) T48 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5507-PA [Drosophila melanogaster]gi|21430070|gb|AAM50713.1| GM18993p [Drosophila melanogaster]gi|24650431|ref|NP_524522.2| CG5507-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(22709678..22709945,22735198..22736189); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637; MD5=2d9e [fly-100309-contam.fasta]
  • CG5507-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • Transcript 48 CG5507-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • GM18993p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(22709678..22709945,22735198..22736189); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(22709678..22709945,22735198..22736189); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • GM18993p OS=Drosophila melanogaster GN=T48 PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(22709678..22709945,22735198..22736189); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637,FlyMine:FBpp0084437,modMine:FBpp0084437; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • GM18993p OS=Drosophila melanogaster GN=T48 PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637,FlyMine:FBpp0084437,modMine:FBpp0084437; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0307705; name=T48-PB; parent=FBgn0004359,FBtr0336724; dbxref=FlyBase:FBpp0307705,FlyBase_Annotation_IDs:CG5507-PB,REFSEQ:NP_001262999,GB_protein:AGB96379; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637,FlyMine:FBpp0084437,modMine:FBpp0084437; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0307705; name=T48-PB; parent=FBgn0004359,FBtr0336724; dbxref=FlyBase:FBpp0307705,FlyBase_Annotation_IDs:CG5507-PB,REFSEQ:NP_001262999,GB_protein:AGB96379; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084437 type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637,FlyMine:FBpp0084437,modMine:FBpp0084437; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0307705 type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0307705; name=T48-PB; parent=FBgn0004359,FBtr0336724; dbxref=FlyBase:FBpp0307705,FlyBase_Annotation_IDs:CG5507-PB,REFSEQ:NP_001262999,GB_protein:AGB96379; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0084437; name=T48-PA; parent=FBgn0004359,FBtr0085065; dbxref=FlyBase:FBpp0084437,FlyBase_Annotation_IDs:CG5507-PA,GB_protein:AAF56637.1,REFSEQ:NP_524522,GB_protein:AAF56637,UniProt/TrEMBL:Q9VBA5,FlyMine:FBpp0084437,modMine:FBpp0084437; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(26883956..26884223,26909476..26910467); ID=FBpp0307705; name=T48-PB; parent=FBgn0004359,FBtr0336724; dbxref=FlyBase:FBpp0307705,FlyBase_Annotation_IDs:CG5507-PB,REFSEQ:NP_001262999,GB_protein:AGB96379,UniProt/TrEMBL:Q9VBA5; MD5=2d9ee5db8c0a9cdd252a38e052a895cc; length=419; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: apical plasma membrane [IDA]
    Biological Process: ventral furrow formation [IGI][IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVEVAQSG PSAIFWLVQV LIVGAAQAAT PFAKEYRNAG LYNGNTLVDL DGSTTLDMGQ  60
   61 EKPTSSSSGL SGGFKSESSV VLPGMLQNSG CPLTTSSHCL RCNKVGCIKC PMYLVTDTRQ 120
  121 CVDQCPAGYL DQWSAHTEFM GRVCVPTGYS GPLMAALAGL LGGFLVCLSL LAVAVMLVKR 180
  181 KRRRKSIKQK LINENTMDRA DFMRQLNEMR PNAEYFLAML NDTRRQIRKL YLSGEVAAAN 240
  241 SYRPIVRDLA KLLILLNRPI ELIPAPPPDW SRLYAWSEQA LERYKPQVGQ LIDFFQASHG 300
  301 HSAGHHEVLY AAPNKKKQLQ QPSIFRQQVT PTATPQGVGE LMAGDRSSSA SAQQKLHLFG 360
  361 SLISLHEFEE PRASDPFGSS FNTLKSGNLI SDLNASSLWL EDEFYKLGFR PQDEITTEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] deduced N/A No confident structure predictions are available.
    2 View Details [301..419] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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