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Protein Overview: FBpp0308670, dei-PA

General Information:
Name(s) found: FBpp0308670 [FlyBase]
dei-PA / FBpp0084381 [FlyBase]
Description(s) found:
Found 31 descriptions.
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  • type=protein; loc=3R:22273262..22274416; ID=FBpp0308670; name=tx-PB; parent=FBgn0263118,FBtr0339598; dbxref=FlyBase:FBpp0308670,FlyBase_Annotation_IDs:CG5441-PB; MD5=4f25fc0bf4371ab6014a550499a6ecfe; length=384; release=r5.56; species=Dmel; [FlyBase]
  • The gene delilah is referred to in FlyBase by the symbol Dmel\dei (CG5441, FBgn0008649). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:22267049..22274716. It has the cytological map location 97B2. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. There is experimental evidence that it is involved in the biological process</span>: mesoderm development. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: mesoderm development [IEP]
    regulation of transcription [IEA]
    somatic muscle development [TAS]
    muscle attachment [TAS]
    Molecular Function: transcription factor activity [ISS]
    specific RNA polymerase II transcription factor activity [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSNTYELHN YADLNDMARA TDSKDSRKRK TASARGEKYS LRQKRQKRGS NEDGESANLA  60
   61 DFQLELDPIA EPASKSRKNA PTKSKTKAPP LSKYRRKTAN ARERTRMREI NTAFETLRHC 120
  121 VPEAIKGEDA ANTNEKLTKI TTLRLAMKYI TMLTDSIRDP SYESEFIGEC LEESANREAR 180
  181 VDLEANEEAE VELPVPVAKK PAKTKGSGKK SSAASKRQSQ KQAKIVPQIP PISSGESCYA 240
  241 TSSIGSPASS AYASLSSSSN SHSSSSSPGL ELDSLVGLNG ISALDSLLLD TSDGDSLSCL 300
  301 SPGYGSLLTG SGESLLPGCR GDLPMSGLEK SDVELSLRLL DQSSKDSFDF ASDQQPSACI 360
  361 SSFSALDGYP FDLLHSDFPD MFLT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] deduced N/A No confident structure predictions are available.
    2 View Details [83..179] PSI-BLAST 15.522879 Myod B/HLH domain
    3 View Details [180..384] MSA 9.199997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle