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Protein Overview: CG4553-PA

General Information:
Name(s) found: CG4553-PA / FBpp0084214 [FlyBase]
Description(s) found:
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  • gi|7301341|gb|AAF56469.1| CG4553 [Drosophila melanogaster] [NCBI NR]
  • gi|24650072|ref|NP_651396.1| CG4553 [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG4553 (CG4553, FBgn0039336). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21301484..21302637. It has the cytological map location 96E1. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG4553-PA translation from_gene[CG4553 CG4553 FBgn0039336] seq_release:3 mol_weight=42291 cds_boundaries:(3R:21,290,852..21,291,940[-]) aa_length:363 transcript_info:[CG4553-RA seq_release:3] gene_info:[gene symbol:CG4553 FBgn0039336 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBR0) CG4553 protein [DrosMelano7227.FASTAC.txt]
  • (AE003752) CG4553 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG4553-PA [Drosophila melanogaster]gi|24650072|ref|NP_651396.1| CG4553-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(21301484..21302575); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469; MD5=6287777913539c [fly-100309-contam.fasta]
  • CG4553-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(21301484..21302575); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(21301484..21302575); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG4553 OS=Drosophila melanogaster GN=CG4553 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(21301484..21302575); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469,FlyMine:FBpp0084214,modMine:FBpp0084214; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • type=protein; loc=3R:complement(25475762..25476853); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469,FlyMine:FBpp0084214,modMine:FBpp0084214; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(25475762..25476853); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469,FlyMine:FBpp0084214,modMine:FBpp0084214; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • CG4553 OS=Drosophila melanogaster GN=CG4553 PE=1 SV=1 [DROME.fasta.20160308]
  • FBpp0084214 type=protein; loc=3R:complement(25475762..25476853); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469,FlyMine:FBpp0084214,modMine:FBpp0084214; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(25475762..25476853); ID=FBpp0084214; name=CG4553-PA; parent=FBgn0039336,FBtr0084839; dbxref=FlyBase:FBpp0084214,FlyBase_Annotation_IDs:CG4553-PA,GB_protein:AAF56469.1,REFSEQ:NP_651396,GB_protein:AAF56469,UniProt/TrEMBL:Q9VBR0,FlyMine:FBpp0084214,modMine:FBpp0084214; MD5=6287777913539c0e1fb096c11216dc48; length=363; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARMIQRGL HTARSCLLAR APRRANPGLG YQLEQLQEHP EKSSEASEDY ADLESDFMDV  60
   61 QKTHRQYERE QQQHRDRIRQ FMIKHKYFRD AKLPNLLLHA EKEQMRLLHE RDPEEWSVER 120
  121 LAESFPATPD IVQKILRAKW RPRSVQRIRS HDETVIKNWQ LLGTGKGDFS IPPSLLQHLQ 180
  181 KFAERRWQDL RELKIQDWPT KSQLPTPQGN EFRKLLGSSS KTTEEMPTPQ IPSGYEAPPS 240
  241 AAEDETYLLD KIRNKKKMRL QELKELQLVE SAPAVPEEMK RPIENPSGTG FLPSFVPKFA 300
  301 SSEIVISAAD QRKYEITQVK TRIVIPRKLH RQGATYRVED AYYDDDGELL YRVPGMTRAS 360
  361 GDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..194] MSA 11.031977 View MSA. No confident structure predictions are available.
    2 View Details [195..286] deduced N/A No confident structure predictions are available.
    3 View Details [287..363] MSA 2.014994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
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