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Protein Overview: CG11910-PA

General Information:
Name(s) found: CG11910-PA / FBpp0084220 [FlyBase]
Description(s) found:
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  • gi|7301337|gb|AAF56466.1| CG11910 [Drosophila melanogaster] [NCBI NR]
  • gi|21356671|ref|NP_651393.1| CG11910 [Drosophila melanogaster] [NCBI NR]
  • gi|17944175|gb|AAL47983.1| GH14162p [Drosophila melanogaster] [NCBI NR]
  • This gene is referred to in FlyBase by the symbol Dmel\CG11910 (CG11910, FBgn0039332). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21206785..21208522. It has the cytological map location 96D2-96D3. Based on sequence similarity, it is predicted to have molecular function</span>: protein binding. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
  • >CG11910-PA translation from_gene[CG11910 CG11910 FBgn0039332] seq_release:3 mol_weight=53291 cds_boundaries:(3R:21,197,639..21,199,051[-]) aa_length:471 transcript_info:[CG11910-RA seq_release:3] gene_info:[gene symbol:CG11910 FBgn0039332 gene_boundar [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBR3) CG11910 protein (GH14162p) [DrosMelano7227.FASTAC.txt]
  • (AE003751) CG11910 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG11910-PA [Drosophila melanogaster]gi|17944175|gb|AAL47983.1| GH14162p [Drosophila melanogaster]gi|21356671|ref|NP_651393.1| CG11910-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:complement(21206979..21208394); ID=FBpp0084220; name=CG11910-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466; MD5=e0649869b2ef [fly-100309-contam.fasta]
  • GH14162p [Drosophila melanogaster] [nr-271106-contam.fasta]
  • CG11910-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:complement(21206979..21208394); ID=FBpp0084220; name=CG11910-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:complement(21206979..21208394); ID=FBpp0084220; name=CG11910-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG11910 OS=Drosophila melanogaster GN=CG11910 PE=2 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:complement(21206979..21208394); ID=FBpp0084220; name=alrm-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466,FlyMine:FBpp0084220,modMine:FBpp0084220; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG11910 OS=Drosophila melanogaster GN=alrm PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:complement(25381257..25382672); ID=FBpp0084220; name=alrm-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466,FlyMine:FBpp0084220,modMine:FBpp0084220; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:complement(25381257..25382672); ID=FBpp0084220; name=alrm-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466,FlyMine:FBpp0084220,modMine:FBpp0084220; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • Astrocytic leucine-rich repeat molecule OS=Drosophila melanogaster GN=alrm PE=2 SV=1 [DROME.fasta.20160308]
  • FBpp0084220 type=protein; loc=3R:complement(25381257..25382672); ID=FBpp0084220; name=alrm-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466,FlyMine:FBpp0084220,modMine:FBpp0084220; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:complement(25381257..25382672); ID=FBpp0084220; name=alrm-PA; parent=FBgn0039332,FBtr0084846; dbxref=FlyBase:FBpp0084220,GB_protein:AAF56466.1,FlyBase_Annotation_IDs:CG11910-PA,REFSEQ:NP_651393,GB_protein:AAF56466,UniProt/TrEMBL:Q9VBR3,FlyMine:FBpp0084220,modMine:FBpp0084220; MD5=e0649869b2efa865f5cc8067341552a5; length=471; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 471 amino acids

    Gene Ontology:
    Cellular Component: insulin-like growth factor binding protein complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLWWLLSL QVVLILPPSY HLATPSSGSG QLRRLWLQDH CSAGICTNVV IGRSDYVILS  60
   61 QAPIGGTTML TFLNSSIAKI PHLLFDTFPD LQVLRMENCS LETFEKPQFE GASNLMSLFL 120
  121 GYNRLKDIPK NIFLGADNLA TLHLQGNQLK QLGNHSFHAL KEVKELSLAE NQLEQISLGV 180
  181 FSGMRKLMDL NLAGNRLDAL PRGVFDRNLN LTKLNLARNR FTAFESELLK LQPVFTQLDI 240
  241 SGNIFQELTL NFTMLDVAIA HSCDLRRLTV YGVIHELDLH NNSLREMPHI PLAANVSSLD 300
  301 LSHNPLGNLQ GNPLRRFTSL LRLNLSATGA HELPEGLFKK QSHLQMLDIS GNSIYSLKIT 360
  361 IFDSLKALQY FYFQQNNWNC DFLQLLMSSF VKRKDISFME DITAPELVDD YVDGIACWYE 420
  421 SDKQSKKCES GGSDAAMELS VVRNEIKTFT ELVEKKFVKV YRMLEEMKMK L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 55.045757 No description for 2id5A was found.
    2 View Details [396..471] PSI-BLAST 18.69897 Ribonuclease inhibitor


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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