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Protein Overview: CG31108-PA, FBpp...

General Information:
Name(s) found: FBpp0308354 [FlyBase]
CG31108-PA / FBpp0084177 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • type=protein; loc=3R:complement(20938930..20940645,20940701..20940914,20940977..20941762,20941834..20941871); ID=FBpp0308354; name=CG31108-PB; parent=FBgn0051108,FBtr0339247; dbxref=FlyBase:FBpp0308354,FlyBase_Annotation_IDs:CG31108-PB; MD5=dee446e640be4707248f25afea34dbde; length=917; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG31108 (CG31108, FBgn0051108). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20938587..20948631. It has the cytological map location 96C1. Based on sequence similarity, it is predicted to have molecular function</span>: tubulin-tyrosine ligase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: protein modification process. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 917 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein modification process [IEA]
    Molecular Function: tubulin-tyrosine ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSLCEALT NSSISFDYQK EDDWITSGKL GSREAVLVFR TNILNPKIRK TLSEKSSAQV  60
   61 LTDTKDNEEK PVQSPQKLAE EEPTSSEPSS KEALSGSTQQ KIFLLKKPQQ CDKSDKLTFS 120
  121 SPFKKILNRY SSSDTSISSE GEEPANSSEN KSRVLKTSQN AINIKLATDL SNESGYESIA 180
  181 PAKTISNTEV IEEDQEETSE DDAECGINMP ASKLKITYKF HQTETKLLRK LFNVHGLTEV 240
  241 QGENNNFNLL WTGVHMKLDI VRNLAPYQRV NHFPRSYEMT RKDRLYKNIE RMQHLRGMKH 300
  301 FDIVPQTFVL PIESRDLVVA HNKHRGPWIV KPAASSRGRG IFIVNSPDQI PQDEQAVVSK 360
  361 YIVDPLCIDG HKCDLRVYVL VTSFDPLIIY LYEEGIVRLA TVKYDRHADN LWNPCMHLCN 420
  421 YSINKYHSDY IRSSDAQDED VGHKWTLSAL LRHLKLQSCD TRQLMLNIED LIIKAVLACA 480
  481 QSIISACRMF VPNGNNCFEL YGFDILIDNA LKPWLLEINL SPSMGVDSPL DTKVKSCLMA 540
  541 DLLTCVGIPA YSPEMKSHYD QKWSRFRSSS CQRIATFPST SQKTKKSKKK GAAINLNLTG 600
  601 EEQRILRNAR LQYSRRGGFV RIFPTDDSMQ RYGNFLDSAN GIPISTPNVQ SQTFQTPIIQ 660
  661 HNYNQMLHQN LYSKDGRQKQ DDNNEADRIW QYERALETDS EIPFVKKPTV EKCEVEGRRL 720
  721 RKIMLKKISN GSELTPFQAR QTFSMYLESV LRRLTEDPKD NHEKIILKFL NKFGGSVKPP 780
  781 VMFRNMQTIK VASKARSAMV AKLLGDFLEN YKRDTEAYVD SFDHFGMIPS SAYNQFLMHA 840
  841 QESDLEAVLT LHTNVTGIMP FLYNRCGLSV PPTPPIPSGL HGFLRALPSM VSSTGINREL 900
  901 SKYDGYFKNF DKEKVFL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] deduced N/A No confident structure predictions are available.
    2 View Details [207..566] FFAS03 0.95 No description for 2p0aA was found.
    3 View Details [567..685] deduced N/A No confident structure predictions are available.
    4 View Details [686..917] MSA 3.082976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle