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Protein Overview: CG6995-PC

General Information:
Name(s) found: CG6995-PC / FBpp0099843 [FlyBase]
Description(s) found:
Found 16 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG6995 (CG6995, FBgn0039229). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20643191..20648095. It has the cytological map location 96A23. Based on sequence similarity, it is predicted to have molecular function</span>: mRNA binding. There is experimental evidence that it is involved in the biological process</span>: regulation of alternative nuclear mRNA splicing, via spliceosome. One allele is reported. No phenotypic data is available. It has 3 annotated transcripts and 3 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 392 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IC]
    Biological Process: regulation of alternative nuclear mRNA splicing, via spliceosome [IMP]
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA]
    mRNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELAEKSTAA PGGATSSTAS SAAGSKSGSG SSAGNGTGAN SNNKQATLSR NLWVSGLSTL  60
   61 TRASDLKAIF SKFGKVIGAK VVTNTRTPGT RCYGYVTMSS SADASRCIEN LHRTELHGRI 120
  121 ISVERTKNEI GGSLNSKEGK GKAPGDAGNK KKEDDSGKKS GSGKGSSSNS GDDKKGGDGN 180
  181 GDSKSVGGDL KRDGKESNRA RSRRNDDRGK SLASQDRPRH DRERSAKGSQ DHRSGRNPRD 240
  241 VDREIQQRQR ERERRQREML SYQKIREERE RQRLRERERE LREEERRRRE ARERQRIEEE 300
  301 RLQEERRKLA VERERLEREK AELLRMERER QKLEREKIEL ERLELKRQQM KYAKKKTKTD 360
  361 RNALHSCQRR GDNTDIPIYL FYTLSESICP CD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] PSI-BLAST 19.0 Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI)
    2 View Details [234..392] PSI-BLAST 4.221849 No description for 2i1jA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle