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Protein Overview: cav-PA

General Information:
Name(s) found: cav-PA / FBpp0083943 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene caravaggio is referred to in FlyBase by the symbol Dmel\cav (CG6219, FBgn0026257). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:20046864..20049254. It has the cytological map location 95F2. It is reported to have molecular function</span>: satellite DNA binding. There is experimental evidence that it is involved in the biological process</span>: telomere maintenance; telomere capping. 9 alleles are reported. The phenotypes of these alleles are annotated with: chromosome, telomeric region; mitotic metaphase. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    chromosome, telomeric region [IDA]
    chromosome, centromeric region [IDA]
    nuclear chromosome, telomeric region [IDA]
    Biological Process: telomere maintenance [IMP]
    telomere capping [IEP]
    Molecular Function: satellite DNA binding [NAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLLLCVNMS GTQMSAFLRK YLADEDKKIR AQFKESDPNN KLILWMHEKT RITEEDLARP  60
   61 YTEDEVKELC LRTKVKVDMT AWNCLWEAKK RFEAKGRFVN KSERFINRMY MKAVRRKMVQ 120
  121 PYPEEFVAQR REIVAAETKK QNISRLDRWQ KKKSQNLSAP ESSPDAHASS NDAVQSHEDQ 180
  181 ANTNLSSLSQ MNFQVEAMAP PGVSSSDLSG IGDDEDEQQQ SGFQDENINR PETEINENSV 240
  241 RCDPINLGRM RTGCINSQAN NSFRNTESDP DYYMFGTQLS TLVRPTSTQE PDDQVNCPET 300
  301 EMNESWVRCD QINSESLSIG PSIDSEGTIT FQNTESEPID VTSIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..345] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle