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Protein Overview: CG13604-PA

General Information:
Name(s) found: CG13604-PA / FBpp0083896 [FlyBase]
Description(s) found:
Found 24 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG13604 (CG13604, FBgn0039137). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:19814528..19818638. It has the cytological map location 95D5. Its molecular function is unknown. The biological processes in which it is involved are not known. 3 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 751 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: RNA metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLPPRKSQ TPTRICISKQ HLTPLQTLLQ MGFPRHRAEK ALASTGNRGV QIASDWLLAH  60
   61 VNDGTLDECA PREYIIYACP TGPFLQQLEE FWAKSRQMCG WNGAHNYVPH ITLVSFFKAP 120
  121 DECSLQLSKA LKQVVDMTGA LLDRPLKLEP YMSQNFMGFF VAEEDANYLK RLALQYVKEV 180
  181 SNSIISDTYE QLDAIVACFP WCGAVSSGTR CIPRSSRSIS LEPHVKSLHL TLAYQFPQAQ 240
  241 FNALKALVET LDASCASNWE LRLYSRDPRL ATKQVQKVVY PHNPHETDEL ELRIGDYIYL 300
  301 NTEVVDSSSD GWAEGISWLT GSTGHLPVNY TERTAESDAW TLHRVVQLSK SVASSLTSAE 360
  361 DLDIVDGRSI STEPDDRQNT AHPDIIEGSS FEESEQSVEK YLRQTLKPCL ELPSVQLLNS 420
  421 HNLTHQHNPN TPTIEITTNM SSSSTSMSKQ PVDEILVEPP AAQPPRPDDT LSVHSDHSLH 480
  481 PGSLDASHAK NRKIYIMRHG ERVDFTFGTW IPYCFDEFGN YMRKDLNMPK TLPRRKNSPE 540
  541 GWQNDSPLTN VGVYQANLIG QALLEAQVQI DHVYCSPSYR CIQTCTSALE GLKLTGKQKI 600
  601 KLEPGLFEWM AWYPSGVPDW LTKNELTEAK FDVDLDYEPV QPASELTARL KESTEQFYER 660
  661 NHDVILQLLE QTTGNILVVA HATTLDTCSR QLTGGVPRST NELRQVIHKI PYCSLATVEQ 720
  721 VDGVWKLVEP ECLPVTHSKN PRFEWNALSA T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] PSI-BLAST 15.045757 Solution Structure of RSGI RUH-011, a UBA Domain from Arabidopsis cDNA
    2 View Details [76..189] FFAS03 1.51 No description for 2d4gA was found.
    3 View Details [190..636] PSI-BLAST 34.39794 No description for 2h8hA was found.
    4 View Details [637..751] PSI-BLAST 35.045757 No description for 2ikqA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.686492203566958 bayes_pls_golite062009
  • transferase activity
    		•  0.66841261245817 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.66326000691279 bayes_pls_golite062009
  • kinase activity
    		•  0.65753777854807 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.64444215862273 bayes_pls_golite062009
  • protein kinase activity
    		•  0.56587465829201 bayes_pls_golite062009
  • binding
    		•  0.0554152720226 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle