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Protein Overview: CE40591

General Information:
Name(s) found: CE40591 [WormBase]
Description(s) found:
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  • WBGene00013465 status:Partially_confirmed UniProt:Q86DA8 protein_id:CAD89753.2 [WormBase]
  • gi|133900728|ref|NP_001023559.2| hypothetical protein Y67H2A.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|118140642|emb|CAD89753.2| C. elegans protein Y67H2A.10, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • CE40591 WBGene00013465 status:Partially_confirmed UniProt:Q86DA8_CAEEL protein_id:CAD89753.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE40591 WBGene00013465 status:Partially_confirmed UniProt:Q86DA8_CAEEL protein_id:CAD89753.2| [wormORF-contam.fasta]
  • Hypothetical protein Y67H2A.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE40591 WBGene00013465 status:Partially_confirmed TR:Q86DA8 protein_id:CAD89753.2 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE40591 WBGene00013465 status:Partially_confirmed UniProt:Q86DA8 protein_id:CAD89753.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y67H2A.10 PE=1 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEALink to PubMed article]
    Biological Process: hermaphrodite genitalia development [IMP]
    morphogenesis of an epithelium [IMP]
    locomotion [IMP]
    receptor-mediated endocytosis [IMP]
    reproduction [IMP]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    DNA binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANCLMQLNQ CGFPNCAQYF ASQYDLTAHI EYTHIPVIEE DVKRKTLLAA SVANGEQPVQ  60
   61 PAPMNLPLSY YSRVFRTAYR PNPIKPEPLK VSFNHYKRRS QRDRQIHPNH MASRILRDMM 120
  121 ARQGRHITIE EAEKRLMDVD FEECGPENNE VRFRCAIVDC NKRYKSMFAL RVHMKIVHNV 180
  181 VVSEDAKSLT NYPSEDVKPN ISALQQAMQH QQIQQQHHHH QQIPTSAPEP SVSSGTPTTG 240
  241 TPAPNTPLAQ GSPLPGAAPT FGNPATNTTS YKCTYCSKRY KTSSGLSNHM MSSHQKISDV 300
  301 QDAPTPQVVE QLISQVRMQR QQQEQNSMEQ GQQRITAPPQ TPQSQNLANL IKSSSHVRSF 360
  361 SVTTTQQPIR FSQQHYQVNL DNQPSTGQVL QMQMQHQKRM KQMQEQQAAQ QAAAAAAAQQ 420
  421 QQQQQQQQGM QMQQAQFSSS PINQMGQQGQ QQQQMGPLPS LQHPQQQQQQ QQYHQMPPQP 480
  481 QHSPYPQQQQ MHHQMVQHSP HHYQQQQQQQ QYQQQHQQSP QFPSYQQSPQ QQQAPPPQRS 540
  541 PIPLSQSLPP LNSMTQQQRA SMQQMPPPNS GPLQYSPPNQ QGFGSMMSSP PNNSQQMTPS 600
  601 QQPPPYNM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..340] FFAS03 4.77 Transcription factor IIIA, TFIIIA
    2 View Details [341..531] PSI-BLAST 7.39794 Sec24
    3 View Details [532..608] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.304205134456748 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle