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Protein Overview: Nop56-PA

General Information:
Name(s) found: Nop56-PA / FBpp0083625 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene Nop56 is referred to in FlyBase by the symbol Dmel\Nop56 (CG13849, FBgn0038964). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:18244817..18246790. It has the cytological map location 94A12. Its molecular function is unknown. The biological processes in which it is involved are not known. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 496 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [ISS][NAS]
    small nuclear ribonucleoprotein complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLYVLYEH AAGFSLFSVK EFEEVSMFLP QVESSVTDLA KFNSIVKLAG FAPFKTAIAA  60
   61 LENINAISEG IVPQDLLSFL DDFFAKLKKK KCTLGIADAK LGAAITEAIG VQCSHFGVVP 120
  121 EILRGVRFHF AKLVKGFTDK SAGVAQLGLG HSYSRAKVKF NVHRSDNMII QSIALLDQLD 180
  181 KDVNTFSMRI REWYSYHFPE LVKIVPDNYM FAKAAKFIKD RKNLTQDQLE DLEKIVMDSA 240
  241 KAQAIIDAAK MSMGMDISIV DLMNIELFAE RVVKLSEYRK KLSTYLHNKM NLVAPNLQSL 300
  301 IGDQVGARLI SHAGSLTNLA KYPASTVQIL GAEKALFRAL KTRSNTPKYG LIYHSSFIGR 360
  361 AGLKNKGRIS RFLANKCSIA SRIDCFLEQP TSVFGETLKQ QVEDRLKFYE SGDVPRKNIE 420
  421 VMKEAIEAAG QEAAITVQSE KKKKKKKRAA EDEGETNGAS NGNGAAAEAE NGNGNDDGEP 480
  481 KKKKKKKNKN KEAVEA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..416] PSI-BLAST 88.0 No description for 2nnwA was found.
    2 View Details [417..496] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle