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Protein Overview: dmrt93B-PA

General Information:
Name(s) found: dmrt93B-PA / FBpp0083410 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • The gene doublesex-Mab related 93B is referred to in FlyBase by the symbol Dmel\dmrt93B (CG5737, FBgn0038851). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:16899729..16902520. It has the cytological map location 93B10. Based on sequence similarity, it is predicted to have molecular function</span>: transcription factor activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: sex differentiation; regulation of transcription, DNA-dependent. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    Biological Process: sex differentiation [IEA]
    regulation of transcription, DNA-dependent [IEA]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSGEPAD EVANKRPRLV ANPKATKIVE PTPAKVTNRV PKCARCRNHG IISELRGHKK  60
   61 LCTYKNCKCA KCVLIFERQR IMAAQVALKR QQAVEDAIAM RLVANKTGRS IDALPPGNIF 120
  121 GLTVTQPSSP RAKREDDQVE KTISEVEQQH LKQREEEYSE SPAVAQDLSA PRRDNVSQTA 180
  181 IDMLAQLFPQ RKRSVLELVL KRCDLDLIRA IENVSPTGKS SPVDVTSNQL PSQEPGMLTT 240
  241 MPQPAPPRSS AFRPVITDQY QSKSVVELKP PVFGGSASAA AAAAICAYPK WFVPLSFPVT 300
  301 MGHLSNLAPR CTLPNCACLD SYQFH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..102] FFAS03 2.95 DM domain of Doublesex (dsx)
    2 View Details [103..325] MSA 13.127997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.975525623596709 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0369044168296944 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle