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Protein Overview: FBpp0297442, FBp...

General Information:
Name(s) found: FBpp0297442 [FlyBase]
FBpp0297441 [FlyBase]
FBpp0297440 [FlyBase]
Cortactin-PA / FBpp0083441 [FlyBase]
Description(s) found:
Found 40 descriptions.
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  • type=protein; loc=3R:complement(16887948..16889056,16889148..16889551,16889620..16889786); ID=FBpp0297442; name=Cortactin-PD; parent=FBgn0025865,FBtr0306349; dbxref=REFSEQ:NP_001247224,GB_protein:AFH06542,FlyBase:FBpp0297442,FlyBase_Annotation_IDs:CG3637-PD; MD5=f9df6ebf38c67c333b6d660cdc9e6f5a; length=559; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(16887948..16889056,16889148..16889551,16889620..16889786); ID=FBpp0297441; name=Cortactin-PC; parent=FBgn0025865,FBtr0306348; dbxref=REFSEQ:NP_001247223,GB_protein:AFH06541,FlyBase:FBpp0297441,FlyBase_Annotation_IDs:CG3637-PC; MD5=f9df6ebf38c67c333b6d660cdc9e6f5a; length=559; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:complement(16887948..16889056,16889148..16889551,16889620..16889786); ID=FBpp0297440; name=Cortactin-PB; parent=FBgn0025865,FBtr0306347; dbxref=REFSEQ:NP_001247222,GB_protein:AFH06540,FlyBase:FBpp0297440,FlyBase_Annotation_IDs:CG3637-PB; MD5=f9df6ebf38c67c333b6d660cdc9e6f5a; length=559; release=r5.56; species=Dmel; [FlyBase]
  • The gene Cortactin is referred to in FlyBase by the symbol Dmel\Cortactin (CG3637, FBgn0025865). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:16887402..16890185. It has the cytological map location 93B8-93B9. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: regulation of cell shape; border follicle cell migration; ovarian ring canal formation. 18 alleles are reported. The phenotypes of these alleles are annotated with: nurse follicle cell; nurse cell ring canal; egg; border follicle cell. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: cytoskeleton [ISS]
    sperm individualization complex [IDA]
    Biological Process: regulation of cell shape [IMP]
    cytoskeleton organization [ISS]
    female germline ring canal formation [IMP]
    border follicle cell migration [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKASAGHQI QATSAASAED DDWETDPDFV NDVSEQEQRW GSKTIDGSGR TAGTIDMDKL  60
   61 REETEQADLD KKKQLLKDQN AGYGYGGKFG VEKDRMDKSA VGHDYQGKVG KHASQKDYSD 120
  121 GFGGKFGVQE DRKDKSAVGW DHVEKVEKHA SQKDYATGFG GKFGVQSDRV DKSAVGWDHI 180
  181 EKVEKHESQK DYSKGFGGKF GVQEDRKDKS AVGWDHKEAP QKHASQVDHK VKPVIEGAKP 240
  241 SNLRAKFENL AKNSEEESRK RAEEQKRLRE AKDKRDREEA AKKTVAENTP RTSTEAPPPK 300
  301 GSRAAIQTGR TGGIGNAISA FNQMQSPVSE TPPARKEPII IPKAQPVKIE LEAKEEPTAS 360
  361 TTSAAVAPTP TVVPAREPET APVAKAAAPP PDVVPQIEVE TVDTPPRSEP QSPVYVPTPQ 420
  421 PEVHAQVQVQ PEPQPQADPE PVVEEEPLYQ NQAEIKAASP LPPTNGTVSE AVAPSGTATV 480
  481 PEEAIYANSD NLADYLEDTG IHAIALYDYQ AADDDEISFD PDDVITHIEK IDDGWWRGLC 540
  541 KNRYGLFPAN YVQVVGQNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] MSA 2.110934 View MSA. No confident structure predictions are available.
    2 View Details [198..390] deduced N/A No confident structure predictions are available.
    3 View Details [391..457] deduced N/A No confident structure predictions are available.
    4 View Details [458..559] PSI-BLAST 20.39794 Solution structures of the SH3 domain of human Src substrate cortactin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle