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Protein Overview: CG18600-PA

General Information:
Name(s) found: CG18600-PA / FBpp0083015 [FlyBase]
Description(s) found:
Found 21 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG18600 (CG18600, FBgn0038601). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:14125918..14127458. It has the cytological map location 91A2. An electronic pipeline based on InterPro domains suggests that it has the molecular function</span>: DNA-directed RNA polymerase activity; DNA binding. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transcription. One allele is reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA]
    Biological Process: transcription [IEA]
    Molecular Function: DNA binding [IEA]
    DNA-directed RNA polymerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDKIIIESV CDHKRDENIP TILKFQNGSL LGDADFSMVE STVDGKKHAL VYAGDQVYTG  60
   61 EVKDSEEVDT YIFIRNKLTN KVKVVPVQEA LMYNHVYKKL ERQKRTGPTM SREHANKKLL 120
  121 KEFGGRKASR FVDNREQMMV NVEVMRQDLD ETVNSSMLNE DEEDGTLGDV SINNEEYLAS 180
  181 IVPEFNKEAT KVDEVYAVES LIPSSLLERL EEEAKVVFST PVQTLPIKSE YLKSCLAKIQ 240
  241 ENPVSSKRDF LHIKLIIYMD ALQSLISLRS RQMQKAELSG ITEKIENDIR HRFADPNVAK 300
  301 KGTRTNFSSE KALTHFIVMA LLLSEKFEVD INVLSRALAT TKARIKQYAH IVNALPKSNS 360
  361 DILSLRLPSK VPALKSGRRF QRKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] MSA 1.037995 View MSA. No confident structure predictions are available.
    2 View Details [125..242] MSA 1.038988 View MSA. No confident structure predictions are available.
    3 View Details [243..384] MSA 1.038979 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle