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Protein Overview: l(3)07882-PA

General Information:
Name(s) found: l(3)07882-PA / FBpp0082928 [FlyBase]
Description(s) found:
Found 27 descriptions.
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  • The gene lethal (3) 07882 is referred to in FlyBase by the symbol Dmel\l(3)07882 (CG5824, FBgn0010926). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:13362649..13365698. It has the cytological map location 90B3-90B4. Based on sequence similarity, it is predicted to have molecular function</span>: snoRNA binding; protein binding. Based on sequence similarity, it is predicted to be involved in the biological process</span>: maturation of SSU-rRNA; rRNA processing; ribosomal small subunit biogenesis. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 852 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [ISS]
    Biological Process: maturation of SSU-rRNA [ISS]
    ribosomal small subunit biogenesis [ISS]
    rRNA processing [ISS]
    Molecular Function: snoRNA binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVAKGKKASA DAVYAKKTTR SANPFDNSTA QSSKRGNPFD VHVNKEKFKI LGRICKHDRG  60
   61 MPGVSRAKAL QKRAQTLGQQ FAVKHKTNRF KDNRIGKHLS GDQLTESVMN ARYLAEKMSQ 120
  121 VRSNQKAEKF NLNDDELLTH RGQTLEEIEQ YRDERSDDEE LDDEALDADF TAAAHFGGEG 180
  181 DSAQDRQAAI DEMIVEQKRR KNEIAKEKDE VYDLTEKLDA NYKLLLPLVA KVTKDEQDAK 240
  241 PPPDAYDKLL KEMIFEPRGS VADKLINPDE LAKQEAARLE KLENERLRRM RADGEEDEEA 300
  301 SVAKPKHRSA DDLDDGYFLA GEDDEGDDTL AYDLDGNLGT HLNGKKEAVL KGDENEDDDD 360
  361 KEGEEEEEED SDEESDSEVD NLSDLKESES ESEPEEAPKA SKKKAKKSAD TIPASLDTSI 420
  421 PFTIKMPKTY EDFTELLSKH ATAQKAIIIE RIIKCNHPKL EGVNRENVVK LYSFLLQYLK 480
  481 DLFEDASEQD IREHFQLLSK LMPYLYELTQ LNPERMSNTL LEVIKEKYEE FRKNHKMYPS 540
  541 LDTLVYFKLV ANLYSTSDFR HPVVTPCFIF IQHVLSRSRV RTRQEISMGL FLVTVVLEFV 600
  601 SQSKRLVPAV FNFLQGIVHM SIPKRDVEQL EITPPFERDG PLSKLLALPA NTESTKLEPQ 660
  661 QLQPTDLVTQ TITPDFKVRA LDTSLLLIKE ALQLVEEHVG ACYLAQPFLA LLSRLPLESY 720
  721 PEHVHQHHKD ATELAEKLAA QKMKPLAPAE KKPKALRLLE PRFEAVYDDK RRPKMSKAKE 780
  781 ERAKLLHKIK REKKGAIREI RRDTSFVQML RLKQTLQSDK ERHEKVKRIY QEASVQQGEL 840
  841 NELSRAKKKK KF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..456] PSI-BLAST 37.522879 Heavy meromyosin subfragment
    2 View Details [457..672] deduced N/A No confident structure predictions are available.
    3 View Details [673..852] FFAS03 0.975 No description for 2qagC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle