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Protein Overview: CG5840-PB

General Information:
Name(s) found: CG5840-PB / FBpp0082896 [FlyBase]
Description(s) found:
Found 18 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5840 (CG5840, FBgn0038516). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:13361409..13362858. It has the cytological map location 90B3. Based on sequence similarity, it is predicted to have molecular function</span>: pyrroline-5-carboxylate reductase activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: oxidation reduction; proline biosynthetic process. One allele is reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 174 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oxidation reduction [IEA]
    proline biosynthetic process [IEA]
    Molecular Function: pyrroline-5-carboxylate reductase activity [ISS]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGITLSTIES SLSPQARVIR VMPNLPAVVC SGCSVFVRGS KATDADADIT QKLLQSVGTC  60
   61 EPVDESQLDV VTALSGSGPA YVFVMIEALA DGAVHMGMPR DLAYRLASQT VLGAGHMVRD 120
  121 SGMHPGQLKD GVTSPAGSTA AALRQLELSG FRAAVSGAVE QATLRCRQIS GKTK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..174] PSI-BLAST 53.522879 No description for 2izzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle