YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: cal1-PA

General Information:
Name(s) found: cal1-PA / FBpp0082841 [FlyBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • The gene chromosome alignment defect 1 is referred to in FlyBase by the symbol Dmel\cal1 (CG5148, FBgn0038478). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:12914013..12917663. It has the cytological map location 89E12. Its molecular function is unknown. There is experimental evidence that it is involved in the biological process</span>: mitotic spindle organization. 6 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 979 amino acids

    Gene Ontology:
    Cellular Component: kinetochore [IDA]
    Biological Process: mitotic spindle organization [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANAVVDEET LEAMVYERSK AWSSKMADFA SLEDGMEIDV AEFDNLFHGE DEDPDLDDVA  60
   61 KEAVEDNVPD EAKLEMGHIN ATSVTELTLI LCANEDNEAK AEIEEILNQT VPVVEEHKRK 120
  121 WREAGLDRIL DTFDEKQIEH HVGRWMRRHN SVYLEASPPK YLPPHHNSIS DESDESMHSI 180
  181 DTARYIQQSR RRNAHMTNKN MTTIKMYRKH SHKRDELRAK YAYGDEQEHR HHMQAVLLRR 240
  241 RERERQLAYL ASTPMQCVYS SGHHMRRKNL RKRRINSWMF DSASSSEEDT SFGGCDCHSC 300
  301 RRHYALSRSV YQSCPYGRGQ REYHHRQMAS RTMHTMRRQH TFDMEMDLRP RLPENECSCC 360
  361 NSDRLCSNVI HIANSSTEEW VVENRSNHLT QETQEKTRKQ KHQPMDARKV SHQPVCSKGH 420
  421 EQKPLSSKAT SVSKLVLSKE KYMQMFDSES SDEDNALAKK GLLCCSDKKK GMTFPTPNAA 480
  481 GKITHPTSSA KKAIRKEARP NGLAQIQEEG PTATNSPIES TYLPVAHMKS VSIDGSSGTS 540
  541 ATFESPAKKA PKRGIRETSP LNGNELQQLI STIPIADEKA SSLMEKVDNC IGRESFDDRN 600
  601 KDFMHMENSS TKTAVEKSTK QKRVSGKKSE IPKSIITNNE ILEKNSTETL SEKQVAAKAK 660
  661 KQSVRKTGAT GKPSTSRLKK SEKTKTTSSV TSTSKLEQVR EEESDVSSEV LAKPKPQCST 720
  721 TASILKQGGD GASNSEDDLQ IALAMSKATY KEEQQKRKKT KREPSNKQPQ SPAEKSMTVF 780
  781 NNQSVACNST ALANDTACYR VLPKRRGVKR AAAVSTTEEK TATNSSSSPT SSLEEMGSPT 840
  841 GGDPDCTVVT STTGCEPPAS ERQEIPATIK ITKRGILLHS PSAPEGASFT LTEQGLGKII 900
  901 GERWARKYLK YHIGSRSFDS RHSVYYQPTP QLAAALSAPQ DAQNIGNISG SSASDDDIFE 960
  961 QINRYGTVYS ILENNSGDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..233] deduced N/A No confident structure predictions are available.
    2 View Details [234..434] deduced N/A No confident structure predictions are available.
    3 View Details [435..552] deduced N/A No confident structure predictions are available.
    4 View Details [553..732] MSA 1.274995 View MSA. No confident structure predictions are available.
    5 View Details [733..827] deduced N/A No confident structure predictions are available.
    6 View Details [828..979] MSA 2.256995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle