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Protein Overview: mRpS10-PB

General Information:
Name(s) found: mRpS10-PB / FBpp0082513 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • The gene mitochondrial ribosomal protein S10 is referred to in FlyBase by the symbol Dmel\mRpS10 (CG4247, FBgn0038307). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11055378..11057408. It has the cytological map location 88E3. Based on sequence similarity, it is predicted to have molecular function</span>: structural constituent of ribosome. Based on sequence similarity, it is predicted to be involved in the biological process</span>: translation. 2 alleles are reported. No phenotypic data is available. It has 4 annotated transcripts and 4 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 173 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial ribosome [ISS]
    mitochondrial small ribosomal subunit [ISS]
    Biological Process: translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMHMKHLDL YSQAIKTLRW TQPMRALSTV NTSSGVQGNL SPAAPAPEPD KLYSKLEIEL  60
   61 RGIDPAVLKS YTWFATTAAE HLGIEKGKCW SPRKAHHERM TLLKSVHIYK KHRVQYEVRT 120
  121 HFRYMNFHKL TGSTLDTFLE YIERNLPEGV ALQASRTELQ EIPEHLRQPP EQV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 29.522879 70S ribosome functional complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.82905885280588 bayes_pls_golite062009
  • structural molecule activity
    		•  9.25405593567362 bayes_pls_golite062009
  • binding
    		•  0.795193544824207 bayes_pls_golite062009
  • RNA binding
    		•  0.60427462690745 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.593237783262061 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle